Oryza glaberrima (African rice): 127781944
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Entry
127781944 CDS
T08853
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00500
Starch and sucrose metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
127781944
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
127781944
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Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
127781944
NCBI-ProteinID:
XP_052164974
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Position
8:complement(22940012..22947144)
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AA seq
799 aa
AA seq
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MASLPHCLSARPLVVAAAPGRPGPGLRGGARRRNAAVSAGNAGRRVGLRRSVASAVEVRV
GEDEEGVEEEEEEEVEAVVMPERYALGGACRVLAGMPAPLGATALDGGVNFAVYSAGASA
ASLCLFTPDDLEAGEVTEEVPLDPLFNRTGNVWHVFIEGELHNMLYGYRFDGMFAPHCGQ
YFDVSNVVVDPYAKAVISRGEYGVPGPGGDCWPQMAGLIPLPYSTFDWQGDLPLRYPQKD
LVIYEMHLRGFTKHSSSNVEHPGTYIGAISKLDYLKELGVNCVELMPCHEFNELEYFSCS
SKMNFWGYSTINFFSPMIRYSSGGIRNCGRDAINEFKTFVREAHKRGIEVIMDVVFNHTA
EGNEKGPILSFRGIDNSTYYMLAPKGEFYNYSGCGNTFNCNHPVVREFIVDCLRYWVTEM
HVDGFRFDLASIMTRGCSLWDPVNVYGSPVEGDMTTTGTPLATPPLIDMISNDPILGDVK
LIAEAWDAGGLYQVGQFPHWKIWSEWNGKYRDIVRQFIKGTDGFAGGFAECLCGSPHLYQ
AGGRKPWHSINFVCAHDGFTLADLVTYNKKYNSSNGEDNRDGENHNLSWNCGEEGEFAGL
SVKRLRKRQMRNFFVSLMVSQGVPMFYMGDEYGHTKGGNNNTYCHDHYVNYFRWDKKEES
SDLQRFCSLMTKFRKQCESLGLADFPTAQRLHWHGHQPGKPDWSETSRFVAFSMKDETKG
EIYVAFNASHLPAVVGLPERPGYRWEPLVDTGKPAPYDFLTDDLPDRAHAVHLFSHFLNS
NLYPMLSYSSIILELQPDD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcctcccgcactgcctctccgcgcgcccgctcgtcgtcgcggcggccccgggg
cggcctgggccggggctgcgcggcggggcgaggcggcggaatgcggcggtttcggcgggg
aacgcggggaggcgggtggggttgaggaggtcggtggcctcggcggtggaggtcagggtc
ggggaggatgaggagggtgtggaggaggaggaggaggaggaggtggaggcggtggtgatg
ccggagaggtacgcgctgggtggcgcgtgcagggtgctcgccggaatgcccgcgccgctc
ggggccaccgcgctcgacggcggggtcaatttcgccgtctactccgccggcgcatccgcc
gcgtcgctctgcctcttcacccccgacgatctcgaggcgggtgaggtgactgaggaggtt
ccgcttgatcctctgttcaatcggacggggaatgtgtggcacgtcttcatcgaaggggag
ctgcacaacatgctgtacgggtacaggttcgatggtatgttcgcccctcactgcggccag
tacttcgatgtctccaatgtcgtggtggatccttatgccaaggcagtgataagccgagga
gagtatggtgtccccggtcctggtggcgattgctggcctcaaatggctggcctgatccct
cttccgtacagtacgtttgattggcaaggtgacctacctctgagatatcctcagaaggat
cttgtaatctatgagatgcatttacgtgggtttacaaagcacagttcaagcaatgtagaa
catccagggacttacattggggctatatcaaagcttgactatctgaaggagcttggagtt
aactgtgtagagttgatgccctgccatgaattcaatgagctggagtacttcagctgctct
tccaagatgaacttctggggatactccacgataaactttttttcaccaatgataagatat
tcatcaggtgggataagaaactgtggccgtgatgccataaatgaattcaaaacttttgtt
agagaggctcacaaacggggaattgaggtgatcatggatgttgtcttcaatcatacagcc
gagggtaatgagaaaggaccaatattatcatttagggggatagataatagcacatactat
atgcttgcccctaagggagagttttacaattattctggttgtgggaataccttcaactgt
aatcatcctgtggtccgtgaatttattgtagattgtttaagatactgggtgacagaaatg
catgttgatggttttcgttttgatcttgcatccataatgaccagaggatgcagtctttgg
gatccagttaatgtgtatggaagtccagtagaaggtgacatgactacgacagggacacct
cttgctactccaccacttattgacatgatcagcaatgatccaattcttggagatgtcaag
ctcattgctgaagcatgggatgcgggaggcctctatcaagtaggtcaatttcctcactgg
aaaatttggtcagaatggaatggaaagtaccgggacattgttcgtcaattcattaaaggc
acagatggatttgctggtggtttcgctgaatgtttgtgtggaagtccacatctataccag
gcaggggggaggaaaccttggcacagtattaactttgtgtgtgcgcatgatggatttacg
ctggctgatttggtgacatataacaagaagtacaactcttcaaatggtgaggataataga
gatggagaaaatcataacctcagctggaactgtggggaggaaggagaatttgcaggtttg
tcggtcaaaagattgaggaagaggcaaatgcgcaatttctttgtttctctcatggtttct
caaggtgttccgatgttctacatgggcgatgaatatggccatacaaaaggaggcaacaac
aacacatactgccatgaccattatgtcaattatttccgctgggacaagaaagaagaatcc
tctgacttgcaacggttctgctctcttatgaccaaattccgcaaacaatgcgagtccctt
ggcctcgcagacttcccaacagctcaacggttgcattggcatggccatcagcctgggaaa
cctgactggtctgagacaagccgtttcgtggccttctccatgaaagatgaaacgaaaggc
gagatctacgtggccttcaacgccagccatttgccggcggttgttggactcccagagcgc
ccaggctaccgctgggagccgctggtggacacaggcaagccagcgccttatgacttcctc
accgacgacctgcctgatcgtgctcacgccgtccacctgttctctcatttcctcaactcc
aatctctaccccatgctcagctactcctccatcatccttgaattgcagcctgatgattga
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