Oryza glaberrima (African rice): 127782142
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Entry
127782142 CDS
T08853
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127782142
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ogl01009
]
127782142
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127782142
Protein phosphatases and associated proteins [BR:
ogl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127782142
Spliceosome [BR:
ogl03041
]
Common components
Common spliceosomal components
SR proteins
127782142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
127782142
NCBI-ProteinID:
XP_052165173
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All DBs
Position
8:15852027..15858297
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AA seq
289 aa
AA seq
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MSQSKEVRYTARSITPPADRNGTSKSKSPTPVRRSTSRSPPPKKSDSRSPPPRRRSTSRS
PRPRRHGRSRSRSRDRSRSRSRDDDLRNPGNNLYVTGLSTRVTEEDLEKFFSKEGKVQSC
HVVLDPRTKESRGFAFVTMDSVDDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKY
CGRRGSQRSSRSPSPYRSRRRERSRSRDRQRDRSRSRDRRRDRSRSRDRRRDRSRSRDRR
RDRSRSRDRRRDRSRSRDRRGSSPHDRDSHRRRGDRSRSPATNGNPKKD
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatccaaggaagtgaggtacactgcacgttctattacacctcctgcagataga
aatggcacttcaaagtcaaagtcacccactccagtgagacgcagtacctctaggtcacct
cctccaaagaagagtgattcaaggtctccacctccaaggaggcgcagtacttcaagatct
cctcgccctagaagacatggcagatcaaggtcaaggtcaagggataggagtcgctccagg
agccgagacgatgatttaagaaacccagggaataacctttatgtgactggattatccact
cgcgtaactgaagaagaccttgagaagttctttagtaaggagggaaaggttcaaagctgt
catgttgttcttgatcctcgtacgaaagaatctcgtgggtttgcctttgtaactatggat
tccgttgatgatgcaagacgttgcataaagtacctgcatcgcactgtacttgaaggtcgc
ctggtcactgtagaaaaagctaaaagaactcgggagagaactcctacacctggaaaatat
tgtggccgcagaggctctcaaagaagttccaggagcccatcaccttaccggtctcgcaga
agggagcgatctcgctcaagagatcgtcagagggaccgctcacgctccagggatcgccgc
agggaccgctctcgctcgagggatcgccgcagggaccgctctcgctcgagggatcgccgc
agggaccgctcgcgctcaagggatcgtcgcagggaccgttcgcgctcaagggatcgtcgg
ggcagctctccacatgacagagattctcacaggaggcgtggagacaggtccaggtcaccg
gctaccaacgggaaccccaaaaaggactag
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