Oryza glaberrima (African rice): 127782211
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Entry
127782211 CDS
T08853
Name
(RefSeq) peroxisome biogenesis protein 5 isoform X1
KO
K13342
peroxin-5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127782211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127782211
Membrane trafficking [BR:
ogl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127782211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_11
TPR_2
TPR_16
TPR_17
TPR_14
TPR_CcmH_CycH
TPR_8
TPR_19
TPR_9
TPR_7
TPR_12
PPTA
TPR_20
PsiA
TPR_10
PEX18_PEX21_C
Motif
Other DBs
NCBI-GeneID:
127782211
NCBI-ProteinID:
XP_052165258
LinkDB
All DBs
Position
8:21825689..21834911
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AA seq
736 aa
AA seq
DB search
MAMRHLITGQGNCAPDGASSSNPFGNLANAIFGQSSKAQSIKELPGSAVNVPTTSELGTA
APLSTIPGSENEFKQDQLPLARGADFIRGGPSHDWVESFRPPGLPEFAVPDTQLKEFEQI
FNSTGPTFGPPVMDGPPQRVLSGVLRSFLASGQAGVPFQPVPVPALGLSESDKQCIHDRS
CIMARHILADQPEEYIQAQVNTLLHSLDIDSNYRMKGPMHGPYPEMEEYWNQSQSAMRSG
PMHNAADKWITEFGKQNNNPEEWAHSFEQQYGSNGWASEFEQHQSQMAMAGGMNMANLAA
MEQSRMLAQTLASNNDPKFQNSKFFQFVSKMSRGELIIEDNQVKQGSASQSSGWADEFQT
QYNANANSWADQFVHEEMSQGADKWASEFSTENNQGGLNENWIDEFSKMRVDDEWAEEFS
GGTFGESSADPWVDEFQNQLSASKQNSGASRGVYVFSDMNPYVGHPNPMQEGQELFRKGL
LSEAVLALEAEVLKNPDNAEGWRLLGVTHAENDDDQQAIAAMMRAQEADPTNLEVLLALG
VSHTNELEQGEALRYLHRWLQNHPKYGGIAPPQPTDSPYGPDVIRLFNEAAQMSPEDADV
HIVLGVLYNLSREYDKAIAAFKTALQLKPQDYSLWNKLGATQANSIQSADAILAYQQALD
LKPNYVRAWANMGISYANQGLYEDSIRYYVRAVAMNPKADNAWQYLRISLSNASRADMIA
ACDSRNLDVLQKEFPL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggcacctcatcaccgggcagggcaactgcgcgccggacggggcgtcgtcg
tccaaccccttcgggaacctcgccaacgccatcttcggccagtcgtccaaggcgcagtca
ataaaggaacttccagggtctgcagttaatgttccaacaacatctgaattagggacagct
gctcccttatcgaccatccctggttcagagaatgagttcaagcaagatcaactgccactt
gcacggggcgctgatttcatccgtgggggtccttctcatgattgggttgaatcttttcgg
cctccaggactcccagaatttgctgtgccagatacacagcttaaagaatttgagcaaatt
tttaacagcacagggccaacctttggaccaccagtcatggatggtccaccacaaagggtc
ttatctggtgtcctacgttctttcctagcaagtggtcaagctggtgtgccatttcaacct
gttccagtaccagcgcttggtttgtctgaaagtgacaagcaatgtatacatgatcgtagt
tgcattatggcacgccacattttggctgaccagcctgaagaatatatccaagcacaggta
aacacattgctgcattcacttgatatcgacagtaattatcgaatgaaaggacccatgcac
ggaccatacccagagatggaggagtattggaatcagtcccaaagcgccatgagatctggt
ccaatgcacaatgctgcagacaaatggataactgagtttggcaagcaaaataataaccct
gaagagtgggctcattcttttgagcagcaatatggttccaatggttgggcctctgagttt
gaacagcatcaatctcagatggccatggcaggaggaatgaatatggcaaacctggcagcc
atggaacaatctcgtatgcttgcacagacattagctagtaataatgacccaaaatttcag
aactctaagttcttccagtttgtttcaaagatgagccgtggtgaacttattatagaagat
aatcaagtaaaacaaggttcagcatcccaatccagtggctgggctgatgaatttcaaacc
cagtacaatgctaatgcaaactcttgggcggatcagtttgttcatgaagagatgtcacaa
ggagcagataagtgggctagtgagttctctactgagaataatcagggtggcctcaacgag
aactggattgatgagttctccaaaatgcgtgttgacgatgaatgggcagaagagttcagt
ggaggaacatttggtgaaagctctgctgatccatgggtagatgagttccagaaccaatta
tcagcttccaaacagaattctggtgcatctcgaggggtttatgttttttcagacatgaac
ccatacgttggtcaccctaatccaatgcaggaaggccaggaactgttccgcaaaggcctc
ctaagtgaagctgttcttgctttagaggctgaagttttgaagaatcctgataatgctgaa
ggttggagactacttggagtaacacatgctgaaaatgatgatgaccaacaggcaatcgca
gcaatgatgcgtgcacaagaagctgatccaacaaacctggaagttcttctcgcacttggt
gtcagtcacacgaatgagttggagcagggagaagcattaagatatcttcataggtggctt
cagaatcaccccaaatatgggggtattgcccctccacagccaactgattcaccttatggt
cctgatgttattagattgtttaatgaggctgcccaaatgtcacctgaggatgctgatgtc
catatagttctaggagtcttgtacaacctatcaagagaatatgataaagctatagctgct
ttcaagacagcgctgcagctgaaaccacaagactattctctctggaataagctaggtgcg
acccaagcaaacagcatccagagtgctgatgcaatattggcctatcagcaggctctggac
ttaaagcccaattatgtgcgtgcatgggctaatatggggattagctatgccaaccaggga
ttgtatgaagactctattcgatactatgtacgggcggttgctatgaatccaaaagctgac
aatgcctggcagtacttgcggatttctcttagtaacgcttcacgagctgacatgatcgct
gcatgtgattcacgcaaccttgacgttcttcagaaagagtttcccctgtga
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