Oryza glaberrima (African rice): 127782212
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Entry
127782212 CDS
T08853
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127782212
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127782212
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
RVP
Motif
Other DBs
NCBI-GeneID:
127782212
NCBI-ProteinID:
XP_052165263
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Position
1:6875695..6881223
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AA seq
748 aa
AA seq
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MAYKRKSPVSSPLLLRQLAAEQGRGADLHLASRGGEGILAGEDMASRSTPSKRPFQKNSS
EQNGRGKWQKTKHNSSQQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVK
IRVDEVVPGCDERVIVITAIDKDREVSHVQTKDNDGGVACSVDGSHGMEKDHTKEEKDES
NKEMDDSEKGLGKEEKDDLEKDHDKEDRDESGKDNDKKADDSSVAKDTNSEPEAQLELEK
GMPLAVKAILLVFDRIFVNEMENGTGDASGERNHVSLRLLVLDSQVGWLLGKNGSVIKQM
STDSCCEIRVSKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVPGAH
NSGSSRSFFNQPDVLPPGMQPNLHLPFQGPNVAHLPNFPEALMHGHGPVPPEPLTFRLLC
SSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAI
LHVQRKIVPTSNTKEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIP
KGVPENDEVVQISGASEAIQEALMQITARLRNHLFRDRMASTVPNVQPPFGLVDPQFGPY
AGNHDSISPRIFPNVPQFHKDFIGRPLDEMSAPWTMKGMQVVGDPISLPDIPGMAHRGMG
GFPGPGQPSIVSTITADVMVPKLVLPSLCGEDGGCLNRIREFSGAKITVADPMGNAMDTA
ILISGTPDQMHAARSLIQAFVLSEPLAP
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggcgtataaaagaaaatctcccgtctcgtctcctctgctcttgcgccaacttgcggct
gaacaggggaggggcgccgacctccatctggcgagcaggggaggggaggggattctggca
ggggaagacatggcttcacgctcgacgccttcgaagaggccgtttcaaaagaattcttca
gagcaaaatggtcggggcaagtggcagaaaacaaagcacaattcttcgcagcagcctcaa
ctgatagtgcaacctggcgttcctattttccgcattctctgccctacttcaaaatctggg
aatgtcattggcaagggtggaggcatcattgcaaagataaggcaagagactggagtaaaa
atcagggttgatgaagttgtccctggttgtgacgagagggttattgtgataactgccatt
gataaggacagagaagttagtcatgtgcaaactaaggacaacgacggaggtgtggcttgt
tctgttgatggcagccatggaatggagaaggaccacactaaggaagaaaaggatgaaagt
aacaaagaaatggatgattcagagaaaggccttggtaaggaagaaaaggatgatttagaa
aaagatcatgataaggaggacagggatgagtcagggaaagacaatgataagaaagcagat
gattcctctgttgcaaaagatacaaattctgagccagaggcgcagctggagctggagaag
ggaatgccattagccgtgaaggccattttgcttgtatttgaccggatttttgtaaatgaa
atggaaaatggaacaggagatgcatctggtgagagaaatcatgtttcattgagattattg
gtgctagacagccaagtaggttggcttttgggaaagaatggtagtgtgattaagcaaatg
tctactgacagctgttgtgaaattcgagtttcaaaggacaagcttccattgtgtgcttta
cctcgagatgaactttgccagatcactggagagctcgactcagtcaggaaaggtctgaat
acagttgctcagttgctatttactcatcctcctaaggagagtgatgttcctggtgctcat
aattctggttcatctcgttcattcttcaatcaaccagatgttcttcctccaggaatgcaa
cctaatctccatctcccttttcaagggccaaatgttgctcatcttcccaattttcctgaa
gctctaatgcatggccatggcccagtcccacctgaaccccttacttttaggttgttatgc
tcaagtgacaaggttggaggtataatagggaagggtggaaacaatatcaagtctattcag
aatgatacaggctgtgaaataaaggttcttgatactgttccaaaatctgaagatcgcatc
gtatttatctcaggacctgcgcatccgggtgatggaatttcccctgcacagaatgcaatt
ctgcatgtgcagcgtaaaattgtaccgacctccaacaccaaggagggtcctgcgatatgt
aggctgattgtttcaccgaaccaagttggttgccttcttggcaaaggtggtagtatcata
gctgaaatgaggaagctatcaggagcacatattatagtgctgagcaaagacaagatccca
aagggtgtcccagaaaatgatgaagttgttcagattagtggggcctctgaagctattcag
gaagctctaatgcagataactgcaagactgcggaaccatcttttccgggacagaatggct
tcaacagtccctaatgtgcagccaccttttggtttggtggatcctcagtttggtccatat
gcgggaaaccatgattctatatctcctaggatttttcctaatgtgcctcagtttcataaa
gattttataggacgaccattggatgagatgtctgctccttggaccatgaagggcatgcag
gttgttggtgatccaatttcattgcctgatatcccaggaatggcgcatagaggaatgggt
ggatttcctgggcctggtcagccatctatcgtatcaaccataactgcagatgtcatggtc
ccaaaattagttttaccttctctatgtggggaagatggaggctgtttaaacagaattcgt
gagttttcaggggctaagataacagtcgcagatccgatgggtaatgcaatggacactgct
attttgatatccggcacaccagaccagatgcatgcagcccgaagtcttattcaagcattt
gtcctaagtgaaccactagccccctga
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