Oryza glaberrima (African rice): 127782322
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Entry
127782322 CDS
T08853
Name
(RefSeq) DNA polymerase I B, mitochondrial
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03030
DNA replication
ogl03410
Base excision repair
ogl03420
Nucleotide excision repair
ogl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127782322
03410 Base excision repair
127782322
03420 Nucleotide excision repair
127782322
03440 Homologous recombination
127782322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ogl03032
]
127782322
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127782322
Enzymes [BR:
ogl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127782322
DNA replication proteins [BR:
ogl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
127782322
DNA repair and recombination proteins [BR:
ogl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
127782322
NER (nucleotide excision repair)
GGR (global genome repair) factors
127782322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
127782322
NCBI-ProteinID:
XP_052165439
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Position
8:complement(3703178..3714426)
Genome browser
AA seq
824 aa
AA seq
DB search
MAVAPPRLLWRWQGSSPWLSSPFRRTRYLSRPAFAAGGRQDYSPSSGMGVSKTGAFRLGL
HGNLNVQSSVQEWVDETKRIFFLRTTNNVRNNITNGTTPLRVGNLRHDPSEDIRSSNYPS
LYNQRERGPSNSIVNRHVDTDLAKHRVMYQSAHAVPAPFSVANNDIKPLNMLDCSNEDIP
WHDSGTVESYLPKVSKSETTLVVDKAIPDKKEHKRITRRVTPNIPDKASLSTESKNARKL
LATIYDKVLVVDNVESARSVVKLLTTKYNGFIHACDTEVANIDVKEETPVGHGEVICFSI
YSGNSDGEADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPSIKKVWHNYSFDNHVIENCG
IKVAGFHADTMHLARLWDSSRRADGGYSLEGLTNDHRIMNAVLKDIHKTGKVSMKTIFGR
KKVRKNGSEGKTISIEPVKKLQREDRELWICYSSLDSMSTLKLYESLKNKLEAKEWIFDG
CPRGTMYDFYEEYWRPFGALLVKMETEGMLVDRAYLSEIEKTAVVERKLAADKFRKWASK
HCPDAKYMNVNSDNQIRQLFFGGIKNRNKPGETWPQSKTFKVPNDESIATEGKKTSKSRT
IKLFTIVEDLKLFTTEGKKTTKTGWLKVRGDVLWSLAGKIPTDHIYKIDDGQEFDEDGSS
VELPEQDIEDTSPYGTAYEAFGGGKKGREACHAIAALCEAFSIDKLISGFIIPLQGDRIS
CKEGRIHCSLNINTETGRLSARTPNLQLSSLQNQPALEKDRYKIRQAFVAAPGNTLIVAD
YGQLELRILAHLTNCKSMLEAFKAGGDFHSRTAMNMYQHVRDAV
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgccgccgcggctgctctggcggtggcaggggtcgtcgccgtggctgtcc
tctcccttccgccgcacccgctacttgtcgcgcccggccttcgccgcgggaggaaggcaa
gattattctcctagttctggcatgggggttagcaaaaccggtgctttcaggctgggattg
catggcaacttaaatgtacaaagtagcgtgcaagaatgggttgatgaaaccaagaggata
tttttcctcaggaccaccaacaatgtcaggaacaacatcactaatggcactactcctctg
cgggttggaaatctgcgtcatgatccctcagaagatatcaggagttcaaactatccttcc
ttgtataatcaaagagaaagagggccatctaattcaattgtaaatagacatgtcgataca
gatttggctaagcatcgtgtgatgtatcagtcagcacatgctgtgcctgccccattcagt
gtcgctaataatgatatcaaaccactgaacatgcttgattgctccaacgaggatattcct
tggcatgattccggtacggtggaatcttatctgcctaaagtttccaagtcagagacaact
ttggtggttgataaagctatcccagacaaaaaggagcacaaacgcattacaaggagagtg
acgccaaatatcccggacaaagcttccttgtccactgagtcaaaaaatgcacggaagttg
cttgctaccatctatgacaaagttttggttgtcgacaatgttgagtcagctaggagtgtt
gttaaactgcttactacaaagtacaatggctttattcatgcatgtgacacggaggtggca
aatattgatgtcaaagaagagacaccagttggtcatggagaagtaatatgctttagcatc
tattcaggaaattctgatggggaggctgattttggaaatggcaaaacatgcatatgggtg
gatgtgctagatggtggaagggatgttctaatggagtttgctcctttctttgaggaccca
tctatcaaaaaggtttggcataactatagttttgataaccatgtcattgagaactgtgga
atcaaggttgctggatttcatgctgatacaatgcatcttgcacgcctgtgggattcttcc
aggagagctgatggtggatattcacttgaaggactaacaaatgatcacagaatcatgaat
gctgttctaaaggacatacataaaactgggaaggtgtcaatgaaaactatttttggtcgg
aaaaaggttagaaaaaatggatctgaagggaaaaccatatctatcgagccagtcaaaaag
ttacaaagggaggatagagagttgtggatttgctattcctcactagattcaatgagtaca
ttgaagctttatgaaagcttgaaaaacaagcttgaagcaaaggaatggattttcgatggt
tgtcctagaggaacaatgtatgatttctacgaagagtattggcgtccctttggtgctctt
cttgtaaagatggaaacagagggaatgcttgttgaccgtgcatacctttcggagattgag
aaaactgctgttgttgaacgaaaattagcagcggataagtttcggaaatgggcatctaag
cattgtcctgatgccaagtacatgaatgtgaatagtgataatcaaattcgccaacttttc
tttggtggcatcaaaaatagaaataagcctggtgaaacttggccacaaagtaaaactttt
aaagtgccaaatgatgaaagcatagctacagagggcaagaagacttcaaagtctcgcact
atcaaacttttcactattgtggaagatcttaaacttttcactacagagggcaagaagact
acaaagactggctggcttaaagtccgtggggacgttttatggagtttggctggtaaaata
cccacagatcatatatataaaattgatgatggccaagagtttgatgaagatgggagcagt
gtggaacttcctgagcaggatatagaagacacttccccatatggaactgcatatgaagcg
tttggtggaggaaagaaaggaagggaagcatgtcatgccattgctgctctatgtgaagcc
ttttctattgacaagttgatatccggcttcattattccattgcagggagatcgtatatca
tgtaaggaagggcgcattcactgttcgttaaatatcaatactgaaacaggacgcttgtca
gcaagaacaccaaacttgcagttatcttccttgcagaatcaacctgctcttgaaaaggat
aggtacaagattcgccaagcttttgtcgcagctccagggaacactcttattgttgctgat
tatggccaactggaactgaggatcttggcgcatcttactaattgtaaaagcatgctggaa
gctttcaaggctggtggtgactttcattctaggacagccatgaatatgtaccagcatgtt
cgtgatgctgtttaa
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