Oryza glaberrima (African rice): 127782330
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Entry
127782330 CDS
T08853
Name
(RefSeq) rRNA (cytosine-C(5))-methyltransferase NOP2C
KO
K21971
methyltransferase NSUN6 [EC:2.1.1.-]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127782330
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127782330
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
PUA
Methyltransf_31
FtsJ
RsmF-B_ferredox
Motif
Other DBs
NCBI-GeneID:
127782330
NCBI-ProteinID:
XP_052165448
UniProt:
I1QI40
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Position
8:complement(14317451..14331027)
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AA seq
589 aa
AA seq
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MDSSASASASPTAAAAADADRYTYSPRLQWQPEVEEYFAAAYGRDRFARISEALAHPSCY
SCIRVNTLKSSTDAVMHKLMNLVDQNGLCGGINGLEIGQQNGGEQAHEGNSVVHKCPYSG
LDNVLFVQGSGPHALHYDSQPDQSIKEVIVSRKCAESVLRGAQVYIPGVLACSSHVEKGD
KVAVSVAIEQPAEDGGWTVGITRGTVLQGLQSDAHHEERKGLYIGQGITAMSRSGIFRVP
HGVAVEMTERVYKLPSFNDVLEGEIFLQNLPSVVAARVLDPQPGERILDMCAAPGGKTTA
IAILMKDQGEIIALDRSHNKVMDILKLAAEMDLNCIKAYKLDALKSVRKTNEAKYIGEAG
SRTDAIVTLAEDSEPCINKVDAGTTNASEDSSTTSVVQTDNKKTDDKRYVSKADLRKNLR
RMRNGPGRNNCSGGRVENSKGFLPNSFDRVLLDAPCSALGLRPRLFAGEETLESLRNHAT
YQRRMFDQAVKLVRPGGVIVYSTCTINPGENEALVRYALYKYKFLSLGSQHPKVGGPGIV
GSFELSTKKYTEEWLTKHESQLVQRFDPSSTLDTIGFFIAKFDVGQKDD
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggattcctccgcctccgcctccgcctcccccacggcggcggcggcggctgacgcggac
cggtacacgtacagcccgaggctgcagtggcagccggaggtcgaggagtacttcgccgcc
gcgtacggccgcgaccgcttcgcccgcatctccgaagccctcgcgcatccttcttgttac
tcttgtattcgtgtcaatactctgaagtcttccactgatgctgtcatgcataaactgatg
aatttggtagatcagaacggactctgtggtggaattaatggtttggagattggtcagcag
aatggtggagagcaagcacatgaagggaattctgtggtgcataagtgcccatattctggc
cttgacaacgttttgtttgtacaaggttcaggaccacatgcactgcactacgatagccaa
cctgaccaatctattaaggaagtgattgtaagtcgaaaatgtgcagagtcggttcttaga
ggagcccaggtgtacatcccaggagttttagcttgcagctcacatgttgaaaagggtgac
aaagttgcagtgtcggttgctattgaacaacctgctgaggatggtggttggaccgttggt
ataacacgaggaactgttttacagggattgcagtcagatgcacatcatgaagaaagaaag
ggtttgtacattggtcaagggatcactgcaatgtcaaggtccggaatatttcgtgttcct
catggagttgcagtggagatgactgagagggtgtacaagctcccatctttcaatgatgtg
ctcgaaggggagatatttcttcagaatcttccaagtgttgtggctgctcgtgtccttgat
ccccagcctggagagcggattctggacatgtgtgctgccccaggtgggaaaacaacagca
attgctatcctgatgaaagaccaaggagaaattattgcccttgatagatctcacaataag
gtgatggatattttgaaattggccgctgagatggacctaaattgcataaaagcttataag
cttgatgcactcaaatctgtacggaagaccaatgaagcaaaatatattggcgaagcaggc
agccgcactgatgcaattgtgacactggcagaggactctgagccttgtattaataaagtc
gatgctgggactactaatgccagtgaagacagttctactacatcagttgttcagactgat
aacaaaaaaacagatgataaaagatatgtgagcaaggcagacctcaggaagaacttaagg
cgaatgaggaatggaccaggaagaaataactgctcaggtggtagagttgaaaattctaaa
ggatttttgcccaatagctttgatcgtgtcctccttgatgctccatgttctgcacttggc
ttaaggcctcgcctctttgctggtgaggaaacgctggaatcactgagaaatcatgcgacg
taccagagaagaatgtttgatcaagctgtcaagctagttcgccctggtggggtgattgtt
tattccacgtgtactataaatccaggagaaaatgaagctttggtcagatatgcattgtat
aagtacaagtttttgtcgctcggatcacagcacccaaaagttggaggacctggtattgtt
ggttcatttgagctatcaaccaagaaatatactgaggagtggttgacaaagcatgaatca
caacttgtccagagattcgatccatcatcaactctggatacaattggtttcttcattgca
aagtttgatgttgggcagaaagacgactga
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