Oryza glaberrima (African rice): 127782349
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Entry
127782349 CDS
T08853
Name
(RefSeq) auxin response factor 2 isoform X1
KO
K14486
auxin response factor
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
127782349
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GFIT
Motif
Pfam:
Auxin_resp
B3
P11_C
Motif
Other DBs
NCBI-GeneID:
127782349
NCBI-ProteinID:
XP_052165482
UniProt:
I1NQJ0
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Position
1:complement(24983388..24989073)
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AA seq
722 aa
AA seq
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MVGIDLNTVEEEEDEEEGGATGTVTAPAEARAGGAVCLELWHACAGPVAPLPRKGSAVVY
LPQGHLEHLGAAPGSGPGAAVPPHVFCRVVDVSLHADAATDEVYAQVSLVADNEEVERRM
REGEDGAACDGEGEDAVKRPARIPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSL
QRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGE
LRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPSCTHRLSQSEF
IIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIGSREADPMWHGSKWKCLVVK
WDDDVECRRPNGVSPWEIELSGSVSGSHLSTPHSKRLKSCFPQVNPDIVLPNGSVSSDFA
ESARFHKVLQGQELLGLKTRDGTVNTASQATEARNFQYTDERSCSINMSNNILGVPRLGV
KTPSGNPGFSYHCSGFGESQRFQEVLQGQEVFRPYRGGTLSDACIRGSGFRQPDGNHAPG
AAFKWLAPQGCDHHGITTSVLPQASSPSSVLMFPQTSSKMPGLEYIYGCLDRNENSRHFK
IGPTQDMTRTDQTLRLWPHLISGKMLDECTRNEKLHSPVGGAEHESNNKCLNTNGCKIFG
ISLTEKAQAGDEVDCGNASYHSRLQSLKPQMPKSLGSSCATVHEQRPVVGRVVDISAVNT
MI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcatcgacctcaacaccgtggaggaggaggaggacgaggaggagggcggcgcc
accggcaccgtcacggcgcctgcggaggcgagggcggggggcgcggtgtgcctggagctg
tggcacgcctgcgctggccccgtggcgccgctgccgcggaagggcagcgccgtcgtgtac
ctgccgcagggccacctcgagcacctcggggccgcgcccggctccggccccggcgccgcg
gtgccgccgcacgtgttctgccgcgtcgtcgacgtcagcctccacgcggacgccgcgacg
gacgaggtgtacgcgcaggtctcgttggttgccgacaacgaggaagtggagaggcggatg
cgggagggagaggacggcgcggcctgcgacggcgagggcgaggacgccgtgaagcggccg
gcccggattccccacatgttctgcaagacgctcacggcctccgacaccagcacgcacggc
ggcttctccgtgcctcgccgcgccgccgaggactgcttcccgccgctggactacagcctg
cagaggccatcccaggagctcgtggcaaaggatctgcacggcacggaatggaggttcaga
catatctatcgaggccaaccacggaggcaccttttaaccactggatggagcgggtttatc
aacaagaagaagctagtatctggggatgcagtgctattcctcagaggtgaagatggagag
cttcgattgggagtgcgccgagctgctcagctaaaaaatgcatctccttttcctgcactt
cataaccagatctcaaatactagtagtcttagtgaagttgcacatgctgtggccgtgaaa
agtatttttcacatctactacaatcccagttgtactcacaggttaagtcagtctgagttc
attataccatattggaagtttatgagaagcttcagtcaacccttttctgttggaatgcga
ttcaaattgagatatgagagtgaggatgcttctgaaagaaggcgtactggaataataatt
ggaagcagagaggcagatccaatgtggcatggttcgaagtggaaatgtttagtggtgaaa
tgggatgatgatgtggagtgccgtcggcctaatggggtatctccttgggagattgagctt
agtggatcagtttcaggatctcatctgtccactccccattcaaaacggctgaaatcatgc
ttcccccaagttaatccagatattgtgcttccaaatggaagtgtttcttcagattttgcg
gagtctgccagattccacaaggtcttgcaaggtcaagaattgttgggtttaaaaactcgt
gatggtactgttaatacagcttctcaggcgactgaggcaagaaattttcagtacactgat
gaacgaagttgctctatcaacatgagtaacaatatcttaggggttccgagacttggggtg
aaaactccaagtggaaaccctgggttttcctaccattgctcaggctttggggaatctcaa
agattccaagaggtcttgcaaggtcaagaagtgtttcgtccttaccgaggagggactttg
tccgatgcctgtataagaggttctggcttccgtcaacctgatggcaaccatgcacctggt
gcagcatttaaatggcttgcaccacaaggatgtgatcatcatgggataaccacatcagtt
ctgccgcaagcatcctctccatcatctgtcctaatgtttccacaaactagttcaaagatg
cctggccttgaatacatatacggatgcctggatagaaatgagaatagccgacattttaaa
attggacctacacaagatatgacaagaactgatcaaacattacgactctggcctcatctt
atttcaggcaaaatgctagatgagtgtacgagaaatgagaagctgcactctccagtcggt
ggtgctgagcatgaatcaaataacaagtgtcttaatacaaatggctgcaaaatctttggt
atatcattgactgaaaaggcccaagcaggcgatgaagtggattgtggcaatgccagttat
cattctcggctccagtctttaaaaccacagatgccaaaatcattgggcagcagttgtgcc
acggtccatgaacaaaggcctgttgttggcagggtcgttgatatttcagcagtgaatacg
atgatctga
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