Oryza glaberrima (African rice): 127782382
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Entry
127782382 CDS
T08853
Name
(RefSeq) peroxisome biogenesis protein 1
KO
K13338
peroxin-1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127782382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127782382
Membrane trafficking [BR:
ogl04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
127782382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_14
ATPase_2
AAA_22
AAA_2
AAA_5
Bac_DnaA
AAA_29
ORC-CDC6-like
DUF815
AAA_7
NACHT
RNA12
nSTAND3
IstB_IS21
AAA_lid_PRS2_C
FtsK_SpoIIIE
T2SSE
Rad17
ATP_bind_1
Motif
Other DBs
NCBI-GeneID:
127782382
NCBI-ProteinID:
XP_052165519
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Position
8:24764169..24771488
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AA seq
1098 aa
AA seq
DB search
MSGGGGMEVEVRVVGGARSCFAALPLHLIHALSRTSVSGDLPPVLALHLRAAATDTAARW
SLAWSGAASRSSAIEVAQELAECISLPDGTVAQLSVARSLAKADSVCIEPFSEDDWEILE
SRADLAEETILTQVGVVYEGMKFPLWLDSHNIVKFVVTSSSPKKSLVQLVPGTEVAVAPK
KRRENSSQDVQKQSALKEEAQTKALLRVQAADRKYVHKFKYKGVELGVILSYAVLVHPDT
AARASISNLQLVTVSSKSSPKRLAQKGKEVTQKKGILLPKERVREVVVYILFSDSVSKGH
VMLPHSIRHYISADIHSWVYVKTFSANVKNDQPILTISPLHFKMQEKVAHDGSELGSQEA
NIWRKTSIPSENRDPFQEAHFGNNDDVLSADVDNTSESILEHKILIKQWLVGQLKDMGLH
VGNSEISPVVLPTKVLLHFEAVDQKHNRGKEFLYLLKVGFENSSYSNSQGNAELSWSIQT
DDLENLELKFGRLELGEPESFDSVLDDGFSNGFKLTRSSLGWMENAMSDVTKRLSVLLSS
TSLRLFDQLKLPFPGHVLVLGPRGSGKTALVRAAAKYFEDHKEILAHVIYIDCSKLTVGK
AKETKQTIEDSISEALLHAPSVILFDDMDNVVSVSSDPQAPQSSSSSDSIVRYLADIMDE
YKDKARNACGYGPIALMASAQSLQSLPQDLTSSGRFDFHVELPVLAIPEREALLKHHVEE
HELQCSKEVLSEIASKCDGYDAYDLDILVDRAVHAAASRFVLPSSASVNCAEPTLVKEDF
LKAIHDFLPVAMRDLSKYAPADGEGGWEDVGGLNEAVTIIKETLELPSKYPNIFTKAPVR
LRSNILLYGPSGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAA
APCLLFFDEFESIAPQRGTQSAGVSDRVVNQFLTELDGVESLTGVFVFAATSKPQSIDAA
LLRPGRFDRLILCDFPGWHERLEILKVHSREVSLASDASLEEVASLTEGFTGADLAAILR
DAKLAAVHKVLEDRNNGISDTQPCISKELLISTAREARPSTSAEQKMQYDMDFGQFVSSR
KSVSTKARESKGKKVTLA
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcggcggcgggatggaggtggaggtgcgggtggtgggcggcgcccggagctgc
ttcgccgcgctcccgctccacctgatccacgccctgtcccgcacctccgtctccggcgac
ctcccgccggtcctcgcgctccacctccgcgccgccgccaccgacaccgccgcccgctgg
tccctcgcctggtccggcgccgcgtcccggtccagcgccatcgaggttgctcaagagctg
gcagaatgcatctcgttgcctgatggaacagttgcacagttgagtgtagctcgctccctg
gccaaagctgattcagtctgtatagaacctttcagcgaggatgattgggagatactggag
agccgtgctgatttggctgaagaaacaatcttgactcaggttggcgttgtttacgagggt
atgaaattcccattgtggttggacagccataatattgtgaagtttgttgtgacctcatct
tctccaaagaaatcactggttcaacttgttccgggaactgaagttgctgtggcacccaaa
aaacgtagagaaaactccagccaggatgtgcaaaagcaaagtgcactgaaggaagaagct
caaacaaaggctctcctgcgtgttcaagcagcagataggaagtatgtgcataaattcaaa
tataaaggtgttgaactgggggtgattctcagctatgctgtgctggtacatccagataca
gctgcaagagcttcaatttccaatcttcagttggtcactgtttcatccaaatcatcacca
aagagacttgctcaaaaaggcaaagaagttactcaaaagaagggtattttactgcctaaa
gaaagggtccgagaagtggtagtctatatcttattctcagactcagtttccaaagggcat
gttatgcttccccactctattcgccactacataagtgcagacattcattcatgggtttat
gtgaagacattctcagctaatgtcaagaatgatcaacctatattgacaataagtccgtta
cattttaagatgcaagaaaaagttgctcatgatggtagtgaattaggaagtcaagaagcg
aacatttggaggaaaactagcatcccttcagaaaatagagatccctttcaggaagctcat
tttggtaacaatgatgatgttctgagcgcagatgttgataacacttctgaatccatattg
gaacataagattctcattaaacagtggcttgttgggcaacttaaagatatgggcttacac
gttgggaactctgagataagtccagtagttttaccaaccaaagttttgctccattttgaa
gcagtagaccaaaagcataacaggggaaaagaatttctatacctgctaaaggttggcttt
gaaaattctagctacagcaattcgcaaggcaatgctgagctttcttggagcattcaaact
gatgatctagaaaacttggaattaaaatttgggaggttggagctgggtgagcctgaatct
tttgattctgtattagatgatgggttcagcaatgggttcaagctgactcgatcttcttta
ggctggatggagaatgcaatgtcagatgtcacaaaaaggctatctgttctcttatcgtca
actagtctgaggttatttgaccagctaaagctccccttccctggtcatgttcttgtcctt
ggacctcgaggttctgggaaaactgctttggttagggctgctgcaaaatactttgaagac
cataaagagatattggctcatgtaatatatatagattgttccaaacttacagtgggcaag
gctaaggagacaaagcaaacaattgaagatagcatttctgaagctctgcttcacgcacct
tcagttatcttatttgatgatatggacaatgtggtttcagtgtcttcagatcctcaagca
cctcagtcatccagttcatctgattctatagtaagatatttggctgatatcatggatgag
tacaaggataaggctcggaatgcatgtggatatggacctattgcattaatggcttcagct
caatcacttcagagtcttcctcaagatttaacttcttctgggagatttgatttccacgtt
gagcttcctgttcttgctattcctgagcgtgaggcgctattgaaacatcatgttgaggag
catgagttacagtgttctaaggaagttctttcagagatagcatcaaaatgtgatggctat
gatgcatatgacttggatattttggttgatagggctgtgcatgctgctgcctctcgcttt
gttctgccttctagcgcctctgtgaactgtgctgaaccaactctagtgaaggaagacttc
ttaaaagcgatacatgacttccttccagttgccatgcgtgatcttagcaaatatgcccct
gctgacggtgaaggtggttgggaagatgttggagggcttaatgaagcagtaaccatcatc
aaagagactcttgaattgccatcaaaatacccgaatatctttaccaaggcacctgtaagg
ttgcgatcaaacattctcctctatggaccatctggatgtggaaaaacacatattgtggga
gctgcagctgccgcttgttctctgcgattcatatcagtcaaaggtccagagctattgaat
aagtacatcggttcttctgagcaatctgttcgtgacttctttgcaaaggcagctgctgca
gcaccttgcctactgttctttgatgagtttgaatccattgcaccccagcgaggaacacag
agtgcaggagtttctgatcgtgttgttaatcaattcttgacagaactagatggtgtagaa
agcttgactggagtatttgtatttgctgcaacaagtaagccacaatcaattgatgctgca
ctcttgcggcctggaagatttgaccgtttgatcttatgtgattttcctggatggcatgag
cgtttggaaattctgaaagttcactctagagaggtttcactggcaagtgatgccagtctg
gaagaggttgcttctttgactgaaggatttacaggtgcagatcttgcagctattctaaga
gatgctaagctggcagcagtgcataaagttctggaggacagaaataatggtatctcagac
acacagccatgtatcagcaaagaactcctaatatctactgctagggaggctagaccttcg
acatcagcagaacaaaaaatgcagtatgacatggacttcggtcaatttgtatcgtctagg
aagtctgtttcaacgaaggcaagggaatctaaaggaaaaaaggtcacgctggcttga
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