Oryza glaberrima (African rice): 127782463
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Entry
127782463 CDS
T08853
Name
(RefSeq) polycomb group protein FIE1 isoform X1
KO
K11462
polycomb protein EED
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127782463
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127782463
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
127782463
PRC2.2
127782463
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
127782463
NCBI-ProteinID:
XP_052165615
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All DBs
Position
8:1727379..1733297
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AA seq
376 aa
AA seq
DB search
MAKLGPGQGLGCEAAVGLLAPSRKREYKACNKLTEGKRPLYAIGFNFLDVRYYEVFATVG
GNRVTTYSCLKDGNFAILQAYIDEDKDESFYTLSWACDLDGTPLLVAAGSNGIIRVINCA
TEKLLKTFVGHGDSINEIRTQALKPSLIISASKDESVRLWNVHTGICILIFAGAGGHRNE
VLSVDFHPSDIYRIASCGMDNTVKIWSMKEFWPYVEQSFTWTDLPSKFPTKYVQFPVLVA
VVHSNYVDCTRWLGDFILSKSVDNEIVLWEPKTKEQSPGEGSIDILQKYPVPECDIWFIK
FSCDFHFNQLAIGNREGKVYVWEVQSSPPVLTARLTNPQCKSAIRQTAVSFDGSTILACS
EDGSIWRWDEVDHPKA
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctggggccggggcaggggttggggtgcgaggcggcggtggggttgctggcg
ccaagcaggaagagggagtacaaggcgtgcaacaagctcaccgaggggaagcggccgctc
tacgccatcggattcaacttcctcgacgtccgctactacgaggtcttcgccactgtcggc
ggcaaccgcgtgacaacctacagctgcctcaaggatggtaattttgctatcctgcaagca
tatattgatgaggataaggatgaatcgttctacacactgagttgggcttgtgatcttgat
ggcacaccgctgttagtggctgcaggaagcaatgggatcattcgggtcatcaactgtgcc
actgagaagttactcaagacttttgttggccatggcgattcaataaacgagataagaact
caagcattaaagccttcgctcatcatttctgcaagcaaggatgaatctgttaggctgtgg
aatgttcacacagggatctgcattttgatttttgctggagcaggaggtcaccggaatgaa
gtattgagtgttgacttccacccatctgatatctaccgcatagcaagttgtggcatggat
aacactgttaaaatatggtcaatgaaggaattctggccatatgttgagcaatcctttaca
tggactgaccttccgtcaaaatttccaacaaaatatgtgcaatttccggtcttggttgct
gtagtacattctaactatgttgattgtactagatggcttggtgacttcattctgtcaaag
agtgttgacaatgaaattgtgctgtgggagccaaaaacaaaagaacaaagtccgggggag
ggtagcattgatattcttcagaagtatcctgtgccagaatgtgatatctggtttatcaaa
ttctcatgcgattttcacttcaatcaattggcaataggcaaccgtgaaggaaaagtctat
gtctgggaagtacagtccagtcctcctgttttaactgctcggctgactaatccgcaatgc
aaatctgcgataaggcagactgccgtgtcatttgatggaagcacaatccttgcctgcagc
gaggatggcagcatatggcgatgggatgaagtggaccatccaaaagcatga
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