Oryza glaberrima (African rice): 127782582
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Entry
127782582 CDS
T08853
Name
(RefSeq) putative heat stress transcription factor B-4a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127782582
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
127782582
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
PRIMA1
Motif
Other DBs
NCBI-GeneID:
127782582
NCBI-ProteinID:
XP_052165810
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All DBs
Position
8:complement(20420147..20422029)
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AA seq
380 aa
AA seq
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MEWEEESEAARQKAAAASASVVPAPFLTKTYQLVDDPATDHVVSWGDDDGGESASSFVVW
RPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRR
KSAAATWPPFPPPPPPFFAPRHFAAGAFFRHGDGMLHGRLGALVTTTERRHWFESAALPV
APSSRLLSQLGPVIAPARRAAATPEEEALMQENHRLRRGNAALVQELAHMRKLYSDIIYF
VQNYVRPVAPSPAAAAALHGLGVLRPPPAGGKAPASEVRGASGRSATSSSSLTVAEDQPT
LLALRLPRTTEKIINEVSGGNRGGSTKLFGVHLSSADEQTSSGASRKRSPPQEQPPTSPA
PKRTLVVEHSELRLSIVSPP
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggaggaggagagcgaggcggcgcgtcagaaggcggcggcggcgtcggcgtcg
gtggtgcccgcgccgttcctgaccaagacgtaccagctcgtcgacgaccccgcgaccgac
cacgtcgtgtcgtggggggacgacgacggcggcgagtccgcctccagcttcgtcgtatgg
cggccgccggagttcgccagggacatcctccccaactacttcaagcacagcaacttctcc
tccttcgtccgccagctcaacacatatgggtttaggaaggtcgtgccggagaggtgggag
ttcgccaacgagttcttcaggaagggcgagaagcagctgctgtgcgagatccaccggcgt
aagtccgcggcggcaacgtggccaccgttcccgccgccgccgccgcctttctttgccccg
cgccatttcgcggccggtgccttcttccgccacggggatggcatgctccatggccgcttg
ggcgcgttggtgacgacgacggagcggcgccattggtttgagagcgcggcgttgccggtg
gcgccgtcgtcgcggctgctctcgcagctggggccggtgatcgcaccggcgcgccgcgcg
gcggcgacgccggaggaggaggcgctgatgcaggagaaccaccggctgcgccgcggcaac
gcggcgctggtgcaggagctggcgcacatgcgcaagctctacagcgacatcatctacttc
gtgcagaactacgtgcgtcccgtggcgcccagcccggccgcggcggccgcgctgcacggc
ctcggcgttctacggccgccgccggcgggcgggaaggcgcccgcgtccgaggtgcgcggc
gcctccggccggagcgccacgtccagtagctcgctcacggtggccgaagaccagcccacg
ctgctggctctgcggctgccgcggacgacggagaagatcatcaacgaggtgtccggcggc
aaccgcggcggcagcaccaagctgttcggcgtgcacctgagcagcgccgacgagcagacg
tcatcaggcgcgagccgcaagagatcaccgccgcaagagcagcctcctacgtcgccggcg
ccgaagcggacgctggtggtggagcacagcgagctgagattgagcatcgtgtcgccaccg
tag
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