KEGG   Oryza glaberrima (African rice): 127782678
Entry
127782678         CDS       T08853                                 
Name
(RefSeq) glutamate--tRNA ligase, cytoplasmic-like
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl00860  Porphyrin metabolism
ogl00970  Aminoacyl-tRNA biosynthesis
ogl01100  Metabolic pathways
ogl01110  Biosynthesis of secondary metabolites
ogl01240  Biosynthesis of cofactors
Module
ogl_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    127782678
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    127782678
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:ogl01007]
    127782678
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ogl03016]
    127782678
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ogl02048]
    127782678
Enzymes [BR:ogl01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     127782678
Amino acid related enzymes [BR:ogl01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   127782678
Transfer RNA biogenesis [BR:ogl03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    127782678
 Prokaryotic type
   Other AARSs
    127782678
Prokaryotic defense system [BR:ogl02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    127782678
SSDB
Motif
Pfam: tRNA-synt_1c tRNA-synt_1c_C tRNA-synt_1c_C2 Arc1p_N_like GST_C tRNA-synt_1e GST_C_2 GST_C_3 GST_C_6 PPR_3
Other DBs
NCBI-GeneID: 127782678
NCBI-ProteinID: XP_052165907
LinkDB
Position
1:complement(8606061..8610249)
AA seq 715 aa
MELKLAFPQDGPPLAILCAAKVAGVSLTLDPKLASGSAPTLHLGSGDFIHGVNTILRYIA
RVASVTSFYGQDAIQAAYVDQWLDYAPVILSGSEFEAACSFLNGYLASRTFLVSYGLSIA
DIVVWSNLAGTGQRWESLRRSKKYQNLVRWFNSIADYSDTLDEVVSAYVGKRGIGKSPAP
SLKEKLPDSKQNISTPEVDLPGAKVGEVCVRFAPEPSGYLHIGHAKAGLLNKYFAERYKG
RLIVRFDDTNPSKESNEFVENVLKDVETLGIKYDIVTYTSDYFPQLMEMAEKLIKQGKAY
VDDTPKEQMRSERMDGVESKCRNNIVEDNLSLWKEMINGTERGMQCCVRGKLDMQDPNKS
LRDPVYYRCNTDPHHRVGSKYKVYPTYDFACPFVDALEGVTHALRSSEYHDRNAQYYRIL
QEMGLRRVEIYEFSRLNMVYTVLSKRKLLWFVQNKKVEDWTDPRFPTVQGIVRRGLKVEA
LVQFILEQGASKNLNLMEWDKLWTINKKIIDPVCGRHTAILKDQRVLFTLTNGPEEPFIR
VLPRHKKYEGAGKKATTFTNKFWLESADASVISIGEEVTLMDWGNAIIKEIKTENGIITE
LLGELHLEGSVKMTKLKLTWLPDIEDLVSLSLVEFDYLIKKKKLEEDEDFLDNLNPCTRQ
EFSALGDANMRNLKQGEIIQLERKGYYRCDAPFIRSSKPIVLFAIPDGRQKSATN
NT seq 2148 nt   +upstreamnt  +downstreamnt
atggagctgaaactagcattcccccaggatggtccaccacttgccatcctctgtgctgct
aaggtcgcaggtgtttccctcaccctcgatccgaagctcgcctcgggttcagcacccacg
cttcaccttggttctggggattttatccacggtgttaacacaattcttcgttacattgct
cgtgttgcatctgttaccagcttctatggtcaggatgctattcaggcagcatatgttgat
caatggctcgactacgccccagtcattctttcaggctctgaatttgaagctgcttgctca
tttctaaatggatacctagcatcacgaacctttttggttagttatggcttgtcaattgca
gacattgtagtatggtcaaatcttgcagggacaggccaacgatgggaaagtctaaggagg
tccaagaaatatcaaaaccttgttcgctggttcaacagcatagcagactattcagacaca
ctagatgaagttgtctctgcttatgttggaaaaagagggataggcaagtctcctgcacca
agcctgaaagagaaattacctgattcaaagcagaatatctcaacccctgaagtagatctc
ccaggtgcaaaagttggggaggtctgcgttcgctttgcccccgagcctagtgggtatctt
cacattggtcatgcaaaggctggacttttgaacaagtactttgctgagagatataaaggg
cgcctgatagttcgatttgatgacacaaacccttcgaaagaaagcaatgaatttgttgag
aacgtcctgaaggatgtagaaacactgggaataaaatatgatatagttacttacacatca
gattattttccgcagttaatggaaatggctgaaaaattgattaagcaaggaaaggcttat
gttgatgatacaccaaaggagcaaatgaggagtgagagaatggatggtgtggaatctaaa
tgtagaaataatattgtcgaggataatctgtcattgtggaaagagatgatcaatggaact
gaaaggggtatgcagtgttgtgtacggggtaaacttgacatgcaggaccctaacaaatca
cttcgagatcctgtatactatcgttgcaacactgatccccatcatcgtgttggctcaaaa
tacaaggtctatccaacttatgactttgcttgtccatttgtcgatgcattggaaggagtg
actcatgctctccgctcaagtgaataccatgatcggaatgcacagtactatcgtatcctt
caagaaatggggttaaggagggtagaaatctatgagttcagcaggttgaatatggtttac
acggttcttagcaaacgcaagcttctctggtttgtacaaaacaaaaaggtggaggactgg
actgatccacgcttccccactgtacaaggcatagtacgtcgtggcttgaaggttgaagct
ttggtacaatttatacttgagcagggtgcttctaaaaatctaaatcttatggagtgggat
aaactctggacaatcaacaagaagataattgatccagtgtgtggaaggcatactgccatt
ctgaaagaccagcgtgtgcttttcactcttactaatggtccagaggaaccattcatccga
gtcttacccaggcacaagaaatacgaaggtgctggaaagaaggctacaaccttcacaaac
aaattttggttggagagtgctgatgcatcagttattagcatcggtgaggaagttactctg
atggactggggaaatgctatcatcaaagaaatcaagacagagaatggaattataactgaa
ctacttggtgaactccatcttgaggggtcagttaagatgacaaagttaaagctaacgtgg
ctgccagatattgaagatcttgtatctctctcgttggtagagtttgactacctaatcaag
aagaaaaagctggaagaagatgaggatttccttgacaatcttaatccatgcactcgccaa
gagttttcggctcttggagacgcaaacatgcggaatctcaaacaaggagaaatcatacag
cttgaaaggaaagggtattacaggtgtgatgctccatttatccggtcttccaaaccaatt
gtccttttcgctattccagatggccgacaaaagtccgcaacgaactag

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