KEGG   Oryza glaberrima (African rice): 127782834
Entry
127782834         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127782834
   04120 Ubiquitin mediated proteolysis
    127782834
  09126 Chromosome
   03083 Polycomb repressive complex
    127782834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127782834
   04121 Ubiquitin system [BR:ogl04121]
    127782834
   03036 Chromosome and associated proteins [BR:ogl03036]
    127782834
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127782834
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127782834
   Cul7 complex
     127782834
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127782834
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127782834
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 127782834
NCBI-ProteinID: XP_052166066
UniProt: I1QI68
LinkDB
Position
8:15324681..15325408
AA seq 169 aa
MAATADNGEKMILLISSDGERFELSEAAASQSKTLSHMIEDDCTDNGVPLPNVTAVVLAK
VVEYFKKHAAVTPKPATEAVAADKAKREEELKSFDAEFVDVDRTMLFELILAANFLNAQD
LLDLTCQHAADLIKDMSVEEVREVFNITNDFTPEEEAEVRKENAWAFDN
NT seq 510 nt   +upstreamnt  +downstreamnt
atggcggcgacagcggacaacggcgaaaagatgatcctcctgatcagctcggacggcgag
cgttttgagctgtcggaggcggcggcgagtcagtcaaagacgttatcccacatgatcgag
gatgactgcaccgacaatggggttcccctccccaacgtcaccgccgtcgttctcgccaag
gtggtcgagtacttcaagaaacacgccgccgtcacccccaagccggccacagaagccgtc
gccgctgataaagcgaagagggaggaggagctcaagagcttcgacgccgagttcgtcgac
gtcgacaggacgatgctgttcgagttgattttggccgcaaacttcttgaacgcgcaggac
ctgctagatctgacctgccagcacgcggcggacttgatcaaagacatgtcggtggaggag
gtcagggaggtgttcaacatcaccaacgacttcacgccagaggaggaggcggaggtccgt
aaggagaacgcttgggcttttgacaactag

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