Oryza glaberrima (African rice): 127782933
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Entry
127782933 CDS
T08853
Name
(RefSeq) protein GIGANTEA
KO
K12124
GIGANTEA
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
127782933
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NCBI-GeneID:
127782933
NCBI-ProteinID:
XP_052166176
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Position
1:complement(3866417..3875253)
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AA seq
1160 aa
AA seq
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MSASNEKWIDGLQFSSLFWPPPQDSQQKQAQILAYVEYFGQFTADSEQFPEDIAQLIQSC
YPSKEKRLVDEVLATFVLHHPEHGHAVVHPILSRIIDGTLSYDRNGFPFMSFISLFSHTS
EKEYSEQWALACGEILRVLTHYNRPIFKVDHQHSEAECSSTSDQASSCESMEKRANGSPR
NEPDRKPLRPLSPWITDILLAAPLGIRSDYFRWCGGVMGKYAAGGELKPPTTAYSRGSGK
HPQLMPSTPRWAVANGAGVILSVCDEEVARYETANLTAAAVPALLLPPPTTPLDEHLVAG
LPPLEPYARLFHRYYAIATPSATQRLLFGLLEAPPSWAPDALDAAVQLVELLRAVEDYDS
GMRLPKNWMHLHFLRAIGTAMSMRAGIAADTSAALLFRILSQPTLLFPPLRHAEGVELHH
EPLGGYVSSYKRQLEVPASEATIDATAQGIASMLCAHGPDVEWRICTIWEAAYGLLPLSS
SAVDLPEIVVAAPLQPPTLSWSLYLPLLKVFEYLPRGSPSEACLMRIFVATVEAILRRTF
PSETSEQSRKPRSQSKNLAVAELRTMIHSLFVESCASMDLASRLLFVVLTVCVSHQALPG
GSKRPTGSDNHSSEEVTNDSRLTNGRNRCKKRQGPVATFDSYVLAAVCALSCELQLFPFI
SKNGNHSNLKDSIKIVIPGKTNGISNELHNSISSAILHTRRILGILEALFSLKPSSVGTS
WSYSSNEIVAAAMVAAHVSELFRRSRPCLNALSALKQCKWDAEISTRASSLYHLIDLHGK
TVTSIVNKAEPLEAHLTLTPVKKDEPPIEEKNINSSDGGALEKKDASRSHRKNGFARPLL
KCAEDVILNGDVASTSGKAIASLQVEASDLANFLTMDRNGGYRGSQTLLRSVLSEKQELC
FSVVSLLWQKLIASPEMQMSAESTSAHQGWRKVVDALCDVVSASPTKASAAIVLQAEKDL
QPWIARDDEQGQKMWRVNQRIVKLIAELMRNHDSPEALVILASASDLLLRATDGMLVDGE
ACTLPQLELLEVTARAVHLIVEWGDSGVSVADGLSNLLKCRLSTTIRCLSHPSAHVRALS
MSVLRDILNNGQINSSKLIQGEYRNGIQSPTYQCLAASIINWQADVERCIEWEAHSRRAT
GLTLAFLTAAAKELGCPLTC
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcttcaaatgagaagtggattgatgggctccagttctcatcactgttctggccc
ccaccacaggattcacaacaaaaacaggcacaaattctggcctatgttgagtactttggc
cagtttacagctgacagtgagcaattccctgaagatatagctcagctaattcaaagttgc
tatccatcaaaagaaaagcgccttgtagatgaagtattagcaacttttgttcttcatcat
cctgagcatggccatgcagttgtgcatccgattctgtcacgcatcatagatgggacactc
agttatgatagaaatggtttcccgttcatgtccttcatctctttatttagccatacttct
gagaaagagtactcggagcagtgggccttggcctgtggagaaattcttagagttctaact
cactacaacaggccaatcttcaaagttgatcaccaacatagtgaagcggaatgtagcagc
acatctgatcaggcctcatcatgtgagtctatggagaaaagggctaacggttctccaaga
aatgaacctgaccggaagccattgaggccactatctccttggatcacagacatattgctt
gctgcacctctgggtattagaagtgactattttagatggtgtggtggagtcatgggaaaa
tacgcagctggtggagaattgaagcctccaacaactgcttacagccgaggatctgggaag
cacccacaacttatgccatccacgcccagatgggctgttgccaatggagctggagttata
ctaagtgtctgtgatgaggaagtagctcgttatgagacagcaaatttgactgcggcagct
gttcctgcacttctattacctccaccgaccacaccattggacgaacatttggttgcgggg
ctccctcctcttgaaccatatgctcgcttgtttcatagatactatgcaattgctactcca
agtgctacccaaaggttgctttttggtcttctcgaggcaccaccatcatgggccccagat
gcacttgatgcagcagtacagcttgttgaactccttagagcagtggaagactacgattct
ggcatgcggcttccaaagaactggatgcatcttcatttcctgcgtgctattggaactgca
atgtcaatgagagctggtatcgctgctgatacgtctgctgctttacttttccgaatactc
tcccaaccgacattactttttcctccactgagacatgccgaaggagttgaactccatcat
gagccactaggtggctatgtatcatcgtacaaaaggcagctggaagttcctgcatctgaa
gccactattgatgccactgcgcaaggcattgcttccatgctatgtgctcatggtcccgat
gttgagtggagaatatgtaccatctgggaggctgcgtatggtttgctacctctgagttca
tcagcagttgatttgcctgaaattgttgtagctgctccacttcagccacctactttgtca
tggagcctatacttgccattgttgaaagtatttgagtatttacctcgtgggagtccatct
gaagcatgccttatgagaatttttgtggcaacagttgaagctatactgagaagaactttt
ccatcagaaacctctgaacaatccaggaaaccaagaagtcaatctaagaaccttgctgtt
gctgaactccgaacaatgatacattcactctttgtggagtcctgtgcttcaatggacctt
gcgtccagattactatttgtagtattaactgtttgcgtcagtcatcaagctttgcctggg
ggaagtaaaaggccaactggtagtgataatcattcctctgaggaggtcacaaatgattcg
agattaaccaatggaagaaacagatgtaagaagagacaaggaccagttgctacattcgac
tcatacgttctagcagccgtttgtgccttatcttgtgagctccagctgttcccttttatt
tccaagaatgggaaccattcaaatctgaaggactccataaagatagtcatacctggaaaa
accaatggtattagtaacgagctacacaatagcattagctcagcgattcttcatactcgt
agaatacttggcatcttggaagctctgttctccttgaagccatcatctgttggtacttca
tggagttatagttcaaatgagattgttgcagcagctatggttgctgctcatgtttctgag
ttatttcgtcgatccaggccatgcttaaatgcactgtctgcgctgaagcaatgcaagtgg
gatgctgagatttctaccagggcatcatccctttaccatttgattgacttgcatggtaaa
acagtgacctccattgtgaacaaagctgagcctctagaagctcacctgacccttacacca
gtaaaaaaggatgaacctcccattgaggaaaagaacattaactcatcagatggtggtgca
ttggaaaaaaaggatgcttcaagatcacacaggaaaaatggttttgcaagaccactcttg
aaatgtgcagaagatgttatactaaatggtgatgtcgcaagtacttctgggaaagccatt
gcaagtttacaggtggaagcttctgatttggcaaacttcctcaccatggaccgaaatggg
ggttacagaggttctcaaactctcctaagatctgtactgtcagagaagcaggagctatgc
ttctctgttgtctcattgctctggcagaagctcattgcatctcccgaaatgcagatgtct
gcagaaagtacatcagctcatcagggttggagaaaggttgtggatgcgctttgtgacgtt
gtttcagcctcaccgaccaaggcttcagctgctatcgttctgcaggccgagaaggacttg
cagccctggattgctcgagatgatgagcaaggtcagaagatgtggagagtcaaccagcga
atagttaagctgatagcagagcttatgaggaaccacgatagcccagaagcattggtgatc
cttgctagtgcttcagatcttcttcttcgagcaactgatggaatgcttgttgatggtgaa
gcttgtactttaccacaattagagctattggaagtaaccgccagagcagtccatctcatc
gtcgaatggggagattcaggtgtatccgtcgctgatggcctctccaatctgctgaagtgc
cgtctatcaaccaccatccgctgtctttcgcaccccagcgcgcatgtccgtgcactcagc
atgtccgttcttcgcgacatcttgaacaacggacaaataaactccagtaagctcatccaa
ggggaataccggaatggcatccagagcccaacctaccagtgcttggcagcaagcatcatc
aactggcaagccgatgtggagagatgcatagagtgggaagcccacagccgccgggccacc
gggctgacgctcgccttcctcaccgcggcggcgaaggagctcggctgcccactcacttgc
tga
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