Oryza glaberrima (African rice): 127783047
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Entry
127783047 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127783047
Organism
ogl
Oryza glaberrima (African rice)
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Gene cluster
GFIT
Motif
Pfam:
AAA
zf-HC5HC2H
AAA_lid_3
zf-HC5HC2H_2
AAA_16
AAA_22
NPHP3_N
AAA_5
AAA_2
AAA_30
PHDvar_NSD
nSTAND3
AAA_19
AAA_3
AAA_11
Motif
Other DBs
NCBI-GeneID:
127783047
NCBI-ProteinID:
XP_052166287
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All DBs
Position
1:24916190..24925333
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AA seq
1890 aa
AA seq
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MPPSRPKRRRGGSARSRGRKKQKRLDAIHDVAPVSAPPAGAAVVVVGGGESEDSDAEGPR
RSTRVRRAPALLDTSPLPSPRRKRARGGGGVAGSSGGSSRRRSRGRARGEAGVAREIGEE
EEEEEDDEAGNVVWRSRLRDRVKGKAKLDKRVRSLWFDEDYEVELKEEEEEEEDEEEGDE
EEEEEEEQVRTLVVDLREGAEEETMGEESGSLPMRGREVRDREINLTIDLNVEEHEAVEG
VNVVEEEDGEKGGEADEEKGDAIGPGNDLHESKHEEVGDEEGLHEKERTEELGSAVLEGR
NGDELPCNENNAEDGTGSSHEHEHLLVQNEQTVEESNLCVEQQMELDGSSPSEQLKEVQQ
DVQTGGAPNVVLPEEAPKEGVRKFPVSEEKQGTMEIKEGRRCGLCGGGTDGRPPKVALHD
TVDSDNEAYEGALPSEDPNYDMWDGFGDDPGWLGRLLGPIHDQFGIARVWVHQNCAVWSP
EVYFAGLGCLKNVRAALCRGRLLKCSRCGRPGATIGCRVDRCPKTYHLPCSRAEACIFDH
RMFLIACNDHRQYFQPQGDKYVELLRKMKIKKMKADIRKVSHDAWRKDIEAEEKWLENCG
EDDEFLKREGKRLNRDLSRIAPVYIGGTSENEKAYCGWESVAGLSNVIQSMKEVVILPLL
YPEFFSSLGLTPPRGVLLHGHPGTGKTLVVRALIGACSQGNRRIAYFARKGADCLGKYVG
DAERQLRLLFQVAERCQPSIIFFDEIDGLAPSRSRRQDQTHNSVVATLLSLLDGLKSRGS
VIVIGATNRPDAIDPALRRPGRFDREIYFPLPTFEDRSAILSLHTKKWPSPISGAFLSVI
ASQTVGYAGADLQSICTQAAINALKRTCPLKEILLSAEKGFEHGRLPLPSILVEERDWLA
ALAAAPPPCSQREAGIAANDLVSSPLVSYLVPCLLKPLLHLFISLYLDERIWLPSSLLKA
FASIKQVIFSSMEKNNVPHTFWSSYLPSLIQQKGIAKRIASILSGYGLIAYQLGKHDSVL
NHNEQHEKFDAHRLNSTGSHPKGGLAHKLSGFRALAAGAPRSGQQHLIRCLLHGFVGHTV
IHKLDLATMAQEGNGDILSGLTQILLKCLNLGRCIIYMPRIDLWAIDKFHEQEAEDHVLN
VGTSKLGSTATTNIKTCSEVWNSLVDQMGSLLASVSISVLATSELKFQDLPSGVRHFFST
HVVDQCLASSEHTIPRFSVNVDSYFTWDEVIDACCLRISHDLVQQHVQLLHDRAHNNHDE
QKEVFVPMEISAPGEHRSSGSKEASMLTKYPLNMDKHPSCGVSSREHPTQLGTCSAQQEP
PTSNVEDKEDNTEKIDFNEKVATNRSNRIVKDSESLAIMAFGIQILQHPQFSKLCWVTSK
LREGPCTDINGPWKGWPFNSCLLQSITADKSLSGGNNVLKGKEKIPSVRGLVAVGLLAYR
GAYASVLEVCSEVRKVLELLVGQVRTKILEKRSRYRYFHILSQVAYLDDIMSSWAYTFQR
LHSENRRVKTSPKVTVGKSSTRECQGDSNTAEANILGAPAGCSEAQGTPGQHTDDLEVIP
AHCPSEMQENSVQHAPGHLEIHDIVCDLDNDNVTSISSINAVEPDLIHSASLDVHTDSLT
PADAVINDGQSCGVDNDGQMSRVINGEENRISNIERPESHTVSVADFNELQRKNAVASST
STDSAGTSRNMVSTEARGSDNERNTDFPVDDVKLGHLVNPQSQDTMKSLSVLKPPCLYKC
CSVCFNAVYKMVHDILSNSVRPSLHCLAVDDMHDLLSSWSVNLLATVRKWYTSQGIVGSE
ENSGEGHCVCSSDNGCVPRECTCHLESNEDAGTIKDDSYYLSGQPLSFFFKDGVLIPPDI
TAPTTLHCSYMRLCVCSIPGSISMFNRISS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgcccccctcgaggcccaagcggcggcgcggcggctccgcgcgatcccgcggccggaag
aagcagaagcgcctcgacgccatccacgatgtcgcgccggtatccgcccctcccgctgga
gccgccgtcgtcgtcgtcggcggcggcgagagcgaggattccgacgcggagggcccccga
cggagcacgcgggtgcgccgcgcgccggccctgctcgacacctcgccgctcccctccccg
cgccgtaagagggcgcgcggcggcggcggggtggccgggtcgagcggcgggagctcgcgg
aggagaagcagaggtagggcgaggggcgaggcgggggttgcccgcgagattggcgaggaa
gaggaggaggaggaagacgacgaggcggggaacgtggtgtggcgctctcggctgcgggat
agggtcaaggggaaggctaagctggataagcgagttaggagcctctggttcgacgaggac
tacgaggtggagctgaaggaggaggaggaggaggaggaggatgaggaggagggggatgag
gaggaggaggaggaggaggagcaggttagaacattggtggtggaccttcgggaaggagct
gaggaagagacaatgggcgaggaaagtgggagcttgccaatgcgagggagggaagtgagg
gatagggaaatcaatctaaccatcgatttgaatgtggaagaacatgaggctgtcgagggt
gtcaatgtggtggaagaggaagatggggaaaaaggaggcgaagcggatgaggagaaagga
gatgcgattggtcctggaaatgatctacacgaaagcaagcatgaggaggtaggggacgag
gagggtttacatgagaaggagagaactgaagagctgggatcagcagtactagaagggcga
aatggtgatgagctaccttgcaatgagaataatgctgaggatggcactggcagttcacat
gaacacgagcatcttcttgtgcaaaatgagcagactgtggaagagagcaacctttgtgtt
gagcagcaaatggaactggatggttctagtcctagtgagcaattgaaagaggttcagcag
gatgtacagacaggtggtgccccaaatgtagtactgcccgaggaggccccaaaggaagga
gtccgcaaatttccagtttcggaagaaaaacagggtaccatggagattaaagaagggaga
cgttgtgggctctgtggtggagggactgatggaagaccacctaaggttgcattacatgat
acagttgacagtgataatgaagcctatgagggggctttgccttcagaggatccaaactat
gatatgtgggacgggttcggtgatgatcctgggtggcttggaaggttattgggtccaata
catgatcagtttggcattgctcgtgtctgggttcatcagaattgtgcagtttggagtcct
gaggtttactttgctggtttgggctgcctaaaaaatgtaagagcagcactttgccgtgga
aggcttttgaagtgcagccgatgtggcagacctggtgcaactattgggtgtcgagttgat
cgatgtccgaaaacctaccatttgccttgtagtcgagcagaagcctgtatatttgatcac
cggatgtttcttatagcctgcaatgatcatcgacagtacttccaacctcaaggagataaa
tatgttgaactgctcagaaaaatgaagataaaaaagatgaaggcagatatcagaaaggtg
tcacatgatgcatggagaaaggacatagaggctgaggaaaaatggttagagaactgtgga
gaagatgatgaattcttgaaacgtgaggggaagaggctaaacagagatctttcgagaatt
gcacctgtttacataggaggcacttctgaaaatgaaaaggcgtactgtggctgggagtct
gttgctgggctcagtaacgttattcagagcatgaaggaagtggtgatactgcctcttctg
tatcctgagtttttcagttctttaggtcttacacctccaagaggtgttctgctgcatggc
catcctggtactggtaaaacactcgtagtgcgtgcactaataggggcatgctctcagggg
aacagaaggattgcttattttgctcgaaaaggtgctgattgtttgggaaagtatgttggc
gatgctgagagacaactaagacttctgtttcaggtagctgaaagatgtcaaccttcgatc
atattttttgatgagatagatggcttagcaccttctagatccagacgacaagaccagaca
cacaattcagttgtggcgactttgctttctttgctggatggtttgaaatcacggggttca
gttatagtaatcggcgcaacaaatcgtcctgatgctattgatcctgctcttaggaggcca
ggaagatttgaccgtgagatatacttcccgctccccacctttgaggatagatccgctatt
ctttcattacacacgaaaaaatggccaagtcctatttctggggcattcctctcagttatt
gcaagccaaactgttggatatgctggtgctgatctgcagtcaatttgcacccaagctgca
ataaatgctttgaaaaggacttgcccattgaaggaaatcttactctctgcagagaaagga
tttgagcatgggcgacttcctctaccatcaattcttgtggaggaaagggattggcttgct
gctcttgcagctgctccaccaccctgttcacagagagaagcagggattgctgcaaatgat
ctagtttcctctcctcttgtctcctatcttgtgccgtgccttcttaaaccattgctgcac
ctttttatctccctctatttggatgagcgaatctggttaccttcatctcttctgaaggca
tttgcttctattaagcaagttatcttctcatctatggagaagaataatgtgcctcacaca
ttttggtcttcctatctcccatctttgatacaacagaaaggtattgcaaaaagaattgca
tcaatcttgtcaggctatggtctaatagcttatcaactaggaaagcatgattctgtgtta
aatcacaatgaacagcacgagaagtttgatgcccacagattgaattccaccggttctcac
ccaaaaggaggtttagcacataaattatcaggatttagagctttagctgctggagcgccc
agatcaggccaacaacatctgatccgttgccttcttcatggttttgtgggtcatactgta
atacacaagcttgatcttgcaactatggcacaggagggaaacggtgatattcttagtgga
ctcacacaaattcttctaaaatgccttaatcttggaagatgtataatctatatgcctaga
attgatttgtgggccatcgacaagttccatgaacaagaagcagaagatcatgtgctcaat
gtgggaacaagcaagttagggtccacagcaacaacaaatattaaaacatgttctgaagta
tggaattcgttggttgatcagatgggttcattgttagcttctgtatccatcagtgttctg
gccaccagtgaactgaagtttcaagatctccctagtggagtaagacatttcttcagcaca
catgttgtagatcaatgtcttgcttcttcagaacacacaataccaaggttctctgtgaat
gttgacagctactttacctgggatgaggttattgacgcatgctgtttgcggatatcacat
gatttagttcagcagcatgttcaacttttgcatgacagggctcataacaatcatgatgaa
cagaaagaggtctttgttcctatggaaattagtgcaccaggtgaacatagatccagtggg
agtaaggaagccagcatgttaacgaagtatccattgaacatggacaagcatccctcatgt
ggggtttcttcaagagagcatcctactcagctgggcacatgtagtgctcagcaagagcca
ccaacatctaatgttgaagataaagaggacaatactgagaaaattgatttcaatgagaaa
gtcgcaacaaatcgttctaatagaattgtgaaggacagtgaatcactagctattatggcc
tttggaattcagatactacagcacccgcaattttctaaactttgttgggttacatcgaaa
ctacgagagggcccctgcactgatataaatggaccatggaaaggctggccatttaattcc
tgtttattgcaaagcattacagctgataaatcattatctggaggaaacaatgttcttaag
ggcaaagagaagattccgtctgtcagaggacttgttgctgttggtctattagcatataga
ggtgcttatgcatctgttttggaagtctgttctgaggtgagaaaagtcttggaactgtta
gttggacaggtccgaactaaaattttggaaaagagaagtcgatatcggtacttccatatt
ctgtcccaagttgcttatctggatgatatcatgagcagctgggcatacacctttcaaagg
ttacatagtgaaaacaggagagtaaaaacaagtccaaaggtaactgttggaaagtcatcc
acaagagaatgtcaaggcgacagcaacactgcagaagcaaacatacttggtgctcctgct
ggctgctctgaggcccaaggcactcctggccaacatacagatgaccttgaagttattcct
gctcactgccctagtgagatgcaagagaattcagtccaacatgctccaggccatcttgaa
atccatgacattgtctgcgaccttgacaatgataatgtgacatctatatccagcataaat
gcagtggaacctgatcttatccattcagcttcacttgatgtgcacacagattcacttacc
ccagcagatgcagtaataaatgatgggcaatcttgtggggttgacaatgatgggcaaatg
tccagagtaatcaatggagaagaaaaccgcatatctaatattgaaagacctgaaagccac
acagtatctgttgcggatttcaatgagttgcaaaggaaaaatgctgttgcatcctcaact
agtaccgacagtgcaggaacatccaggaacatggtgtctactgaagctcgtggaagtgac
aatgagcggaatactgatttccctgtggatgatgtcaaattaggtcatttggttaatcct
caatcacaggataccatgaaaagtctctcagttctgaaacctccatgtctctacaaatgt
tgctctgtgtgtttcaatgctgtttataagatggttcatgatattctttcaaattcagta
aggcctagtctgcattgcttagcagtcgatgatatgcatgaccttttgtcatcatggtca
gtgaatcttctagcaacagttagaaaatggtatacttctcaaggtattgttggctctgaa
gaaaattctggagaagggcattgtgtttgtagcagtgataatggttgtgttccaagggag
tgcacatgccatttggaaagcaacgaagatgctggaactataaaggatgatagctattat
ctaagtggacagccattaagttttttctttaaagatggtgtattgataccaccagatatc
actgcaccaactacacttcattgcagttatatgagattatgtgtttgctcgataccaggt
tcaatttctatgttcaatcggatctcgagttga
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