Oryza glaberrima (African rice): 127783153
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Entry
127783153 CDS
T08853
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
ogl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127783153
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127783153
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127783153
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
127783153
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
127783153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
Peptidase_M16
ABC_tran
Peptidase_M16_C
AAA_21
AAA_29
AAA_23
AAA_16
SMC_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
127783153
NCBI-ProteinID:
XP_052166381
LinkDB
All DBs
Position
1:39078449..39096287
Genome browser
AA seq
1751 aa
AA seq
DB search
MPSLQLLQLTEHGRNLLSSRRRTLAVVSGALLAGGTLAYAHSARRQKRQEEYSHSDASTQ
TTGNQSICQNGVDGKLVKTRKKKNGLKSLQFLAAILLKKIGPNGTNHLLGLMITAVLRTA
VGHRLAKVQGYLFRAAFLRRVPTFTRLIIENLLLCFLQSTIYQTSKYLTGSLGLHFKKIL
TDLVHADYFENMVYYKLSHVDHRISNPEQRIASDIPKFCSELSGLVQDDLTAVADGLIYI
WRLCSYASPKYVLWILAYVLGAGGAIRKFSPAFGKLKSMEQQLEGEYRQVHSRLRTHAES
VAFYGGENREASHIMQRFQALVKHLNVVLHENWWFGMIQDFLLKYLGATVGVILIVEPFF
AGNLKPESSTLGRAEMLSNLRYHTSVIISLFQSLGTLSISSRRLNLLSGYADRIRELLDV
SRELSGVRDLSMNKKSSVDNYISEANYIEFSGVKVVTPSGNVLVDDLTLRVESGSNLLIT
GPNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSNLNKEIFYVPQRPYTAVGTLRDQLIYPL
TADQETEPLSYGGMVDLLKNVDLEYLLERYPLDKEVNWGDELSLGEQQRLGMARLFYHRP
KFAILDECTSAVTTDMEERFCKRVRAMGTSCITISHRPALVAFHDIVLSLDGEGGWTVQE
NRNGSFISAEPEFDALNSSETDRKSDALAVQRAFIANTKGNALMGPKDHSYSTQLIATSP
NMEIEHTERSNLVPQLQCSPRPFPLRAAAMSKILVPKLFDKQGGQLLAVALLVFSRTWIS
DRIASLNGWLLSSCTGDRSDGIPFTXYVFTILIGTSVKYVLEQDKAAFLRLIGISVLQSA
ANSIVSPSLRNLTSKIALGWRIRMTNHLLQYYLKRNAFYKVFNMSGIDIDADQRITHDVE
KLTNDLAGLVTGMVKPLVDILWFTWRMKILSGRRGVAILYAYMLLGLGFLRAVSPDFGDL
ANQEQELEGTFRFMHSRLRTHAESIAFFGGGSREKAMVEAKFTTMLNHSRTLLRKRWLYG
IFDDFVTKQLPHNVTWGLSLLYALEHKGDRALTSTQGELAHALRFLASVVSQSFIAFGDI
LELHKKFLELSGGINRVFELEELLQTSQSNAAMPSNPIIAASEEIISLHDVDIVTPSQKL
LATQLSCDVSQGKSLLVTGPNGSGKSSIFRVLRGLWPIASGRLTMPSDGIFHVPQRPYTC
LGTLRDQIIYPLSHEEAELKVLSLYKSGDKAITSGSLDDHLKTILENVRLVYLLEREGWD
ATPNWEDILSLGEQQRLGMARLFFHCPKFGILDECTNATSVDVEEHLYKIATSMGITVIT
SSQVSIIXIPTYPNSSNGFLVQGPSACVGVFVDSGSVYETAETAGVSHLLERLSFKDTAH
RSHLQIVQDVEATGGNIGASASREQTVYSYETLKAYLPQAIEVLIDCVRNPLFLQDEVER
QVAFAREEVQELQKNPERFLQESLNLVGYTGALANPLVAPEESLTRINGSIIQKFYHENF
TADRLVVAASGVDHQCLLDVAEPLLSDWHKGSPVERPESKYIGGDFRHRADSEMTHVALA
FEVPGGWLEERDATIMTVVQTLMGGGGSFSSGGPGKGMHSRLYLRVLTKYHTVESFSAFS
NAFDRSGLFGIYLTTPSDFVAKAVDIATKELIAIATPGQVTDIELARAKNSTISAVLMNL
ESRVIVAEDIGRQILTYGCRKPVDHFLQCMDEMTLDDITAFAKKMLSSPPTMASWGDVDK
VPPYEFVCKRF
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcttcagttattgcaactgacagagcacggacgcaaccttttgtcttcgaga
aggagaactcttgcagttgtttctggtgcgttacttgcgggtggaactttagcatatgct
cactcagctcggcgccaaaaacgtcaggaagaatattctcatagtgatgcaagtacacag
accacgggtaatcagagcatttgtcaaaatggtgttgatggtaaattggtaaaaacaagg
aaaaagaaaaatgggttgaaatccttacaatttctggctgctattttgcttaaaaagatt
ggtccaaatggaacaaatcatcttctcggcttgatgataacagctgtgttacgtactgcc
gttggccacagattagcaaaagttcagggctatctattcagggctgcatttcttcggcgt
gttccaacctttacacgcctgattatcgaaaatcttcttttatgcttccttcagtccaca
atatatcagacctccaagtacttgacagggtccttaggtttgcactttaagaagattttg
acagatcttgtccatgctgattactttgagaacatggtttactacaaactctcgcatgta
gatcaccggatctcaaatccagaacaaaggattgctagtgatattcctaagttctgctcg
gaactaagtggactcgtacaggatgatctgactgcagttgcagatgggttaatatacatc
tggcgcctctgctcttatgcaagtccaaaatatgttctctggattctggcatatgtactt
ggtgctggtggtgcaattagaaagttttctcctgcttttgggaaattaaaatccatggag
caacagctagaaggggaatatcggcaggtccattcacgtttgagaacccatgctgagagt
gtggcgttttatggtggtgagaacagagaagcatcgcacatcatgcagaggtttcaggct
cttgtgaagcatttgaatgttgttcttcatgaaaactggtggtttggcatgattcaggat
tttcttcttaagtatcttggtgccaccgttggagttatcttgattgttgaacctttcttt
gctggaaaccttaaacctgaatcatccactttaggacgggcagagatgttgagcaatctt
cggtatcatactagcgtcataatatcattatttcagtctcttggaaccctttctatcagt
tcaagacgcttgaatcttctcagtggctatgcagaccgtattcgcgagttactggatgtt
tcacgtgagctatctggggttcgtgatctatctatgaataaaaaatcttctgtagacaat
tatatcagcgaagcaaattatatagaattttcgggtgttaaggtggtgacaccctcaggg
aacgtcttggttgatgatttaactcttcgggtagagtcgggttctaatcttttgataact
ggtcctaatggtagtggaaaaagctcccttttccgggttcttgggggactgtggccactt
gtgtcaggccacattgtgaaacctggtgttggctctaatcttaacaaagaaattttttat
gttccccagcgaccatatacagccgttggaacacttcgggaccagcttatctatccactt
acagcagaccaggaaactgaaccacttagctatggtggcatggtggatcttctaaagaat
gtggatctggaatatttgctagaacgctaccctcttgataaggaagttaactggggtgat
gaattgtctcttggagagcaacaaagattgggaatggcccggctgttctaccataggcca
aagtttgccatcctggatgaatgcactagtgctgtgacaactgatatggaagagcgtttc
tgcaaaagggttcgagcaatgggcacatcatgcataacaatctctcatcgtccagcatta
gttgcatttcatgacatcgttttgtctttggatggagaaggagggtggacagttcaggaa
aatagaaatggctcctttatctctgctgaaccagagtttgatgcattgaactcatcagaa
actgatcgtaaatctgatgcacttgctgttcaaagggcttttattgccaacacaaagggt
aatgctttaatgggccccaaggatcattcttattctacacagctcatagccacttctccc
aatatggaaatagaacacacagaacggtcaaatctagttccacaattacagtgctcacca
agaccttttccactccgagctgctgcaatgtcaaaaatactggtccctaaattatttgat
aagcaaggtgggcagttgcttgcagtggcattgcttgttttctctcggacttggatttca
gatcgtatagcttcactgaacggttggcttttatcttcatgtactggagatagatctgat
ggtataccttttacttaatatgttttcacaatcttgataggaacgagcgttaagtatgtc
ctggagcaggacaaagctgccttccttcggttaattgggattagtgtgctgcaaagtgct
gcaaattcaattgtgtcaccatcactaagaaaccttacttcaaagattgcccttggctgg
cgaattcgcatgaccaaccatctacttcaatattatttgaaacgaaatgctttttacaag
gtatttaacatgtcaggcatcgatattgatgcagaccaaagaatcacacatgatgtggag
aagttgaccaatgatcttgctggcctagttacgggaatggtgaaaccacttgttgacatt
ctttggtttacatggagaatgaagattttgtcagggcgaaggggagttgctattttgtac
gcatacatgttgctaggtcttggttttctaagagctgtttcccctgactttggtgatctt
gcaaatcaagaacaagaacttgaaggaacattcaggttcatgcactcaagattgcggaca
catgctgagtcaatagctttctttggtggtggatcaagggaaaaagctatggttgaagct
aaattcacaacgatgcttaaccactcaaggactcttctgagaaaaagatggctatatggt
atttttgatgatttcgtgacgaagcagctacctcacaatgtgacatgggggcttagtttg
ttatatgctttggaacacaagggggaccgagctttgacttcaactcaaggagagttggca
catgcacttcgattcttggcatctgtggtgtcacaaagctttatagcttttggtgatatt
cttgagttacataaaaaattccttgaactgtccggtggtattaatagggtgtttgaactc
gaagagcttctacagacatctcaaagcaatgctgccatgccctctaatcctattattgcg
gcatcggaagaaattatttccctccatgatgtggatatcgtaacgccatctcaaaagcta
ttggctacccagttatcttgtgatgtatctcaaggaaaaagccttcttgtgactggccca
aatggcagtggcaagagctccatttttagggtgctccgaggtttgtggcccatcgcttca
gggaggcttaccatgccgtctgatggcatctttcatgttccgcaacgtccgtatacttgt
ctaggaaccttgagggatcagatcatatatcccctctctcatgaggaggcagagttgaag
gttctttcattatacaaatcaggtgacaaggcaataacttctgggtcactggatgatcac
ctgaagacaattctagagaatgttcgattggtctatcttctagaaagagaagggtgggat
gctactcctaactgggaagatattctatccttgggagaacagcagaggctaggcatggct
cgtttgttcttccactgtccaaaatttggtatcctagacgagtgcaccaatgccacaagt
gtcgatgttgaggagcatttgtacaagatagcaactagtatgggcataactgtcatcacc
tcgtcacaagtaagtatcatctagatacccacttatcctaactcttcaaatgggtttctg
gtgcagggcccgtcggcgtgcgtaggggtgttcgtggattccggctcggtttacgagacg
gcggagacggccggcgtgtcacacctgctcgagaggctgtccttcaaggacacggcgcac
cgcagccacctgcagattgtgcaggatgtggaggccaccggaggaaacatcggggcgtct
gcatcaagggagcagacggtgtacagctacgagactctcaaggcctacttgccgcaggcc
atcgaggtgctcatcgactgtgtccgcaatccattgttcctccaagacgaagtcgagcga
caggtggcctttgccagagaagaagttcaggagctacagaagaaccctgagagatttctt
caggaatcacttaatctagttggatacacgggtgctcttgcaaatccgctagtagcccct
gaggagagtctcacacgaatcaatggcagtattattcaaaagttctatcacgagaacttc
actgctgatcgcttggttgtagcagcatcaggtgttgatcatcaatgccttttagatgtt
gcagagcctttattgtctgattggcacaagggctccccagtggaaaggccagagtctaag
tatatcggtggggattttagacatagagcagactcagagatgacccatgttgctttggct
ttcgaagtgcccgggggctggcttgaagagagagatgccacaattatgactgtagtacag
actttaatgggcggtggtggttcattctcttctggtggtcctggaaaagggatgcattca
cggctttatctgcgtgtcttaactaaataccacacagtcgaatcattttcggcatttagc
aatgcatttgatagaagtggcctctttggtatttacttgaccacgccttcagattttgtt
gcaaaggctgttgatattgcgacaaaagaactgattgctattgcaacacctggacaagtg
acagacattgaattggcacgagcgaaaaactcaacaatttctgccgtgctgatgaatctt
gaatccagggtaattgttgcagaagatatagggaggcagatattgacttatggttgcaga
aagcctgttgaccattttcttcaatgtatggacgaaatgactctagatgatataacagct
tttgccaagaagatgttgtcttcaccacccacaatggctagttggggagatgttgataaa
gttcctccatatgaatttgtttgcaagaggttttga
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