Oryza glaberrima (African rice): 127783164
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Entry
127783164 CDS
T08853
Name
(RefSeq) syntaxin-52-like
KO
K08503
syntaxin of plants SYP5
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127783164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127783164
Membrane trafficking [BR:
ogl04131
]
SNARE
SNAP-25[C] (Qc)
STX8
127783164
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GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
DUF5345
SPAM
DUF2730
YjcZ
FAM76
Motif
Other DBs
NCBI-GeneID:
127783164
NCBI-ProteinID:
XP_052166361
UniProt:
I1QH55
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All DBs
Position
8:8852466..8856346
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AA seq
232 aa
AA seq
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MASSSDPWMKEYNEASRLADDINSMIADRGSLPQSGPEIIRHTSAIRRKITILCTRLDSL
EALLSKIPPKSLSDKELHKRQDTLSNLKSKTKQMATSFNMSNFANREDLLGQNKKAADDM
SRVAGLDNQGIVGLQRQIMKEQDEGLEKLEETVLSTKHIALAVNEELTLHTRLIDDLEDH
VDVTNSRLQRVQKRLAILNKRTKGGCSCMCLLLSVVAIVILAVIVWLLIKYM
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcttcggacccatggatgaaagagtacaatgaggcatctaggcttgctgat
gatatcaattccatgattgccgatagagggtctcttccacaatcaggcccggaaattata
cgtcacacatcagccattcgaagaaaaataactattctttgtactagactggatagcttg
gaagcattgttgtccaagattcctccgaagtcactcagtgacaaggagttacacaagcgc
caagacacgctttccaatttgaaatctaaaacaaaacagatggcaacaagttttaacatg
tcaaactttgccaacagggaggacttgcttggtcagaacaagaaggcagctgatgatatg
agcagagttgctggtttggataaccaagggattgttggccttcagaggcaaattatgaaa
gaacaagatgaaggtcttgagaagctggaagagacagtcctgagtacaaaacatatcgct
ttagcagtcaatgaagaacttaccctgcatacgagattgattgatgacttagaagatcat
gttgatgttacaaactcgcgtcttcagcgtgtgcaaaagaggcttgcaattctgaacaag
cgcaccaaaggtggctgctcatgcatgtgcctgctgctatctgtcgtcgcaatagtgatc
cttgctgttatcgtgtggcttcttatcaagtatatgtaa
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