Oryza glaberrima (African rice): 127783313
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Entry
127783313 CDS
T08853
Name
(RefSeq) ABC transporter B family member 10-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127783313
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ogl02000
]
127783313
04147 Exosome [BR:
ogl04147
]
127783313
04090 CD molecules [BR:
ogl04090
]
127783313
Enzymes [BR:
ogl01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
127783313
Transporters [BR:
ogl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
127783313
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127783313
CD molecules [BR:
ogl04090
]
Proteins
127783313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_29
AAA_25
DUF815
Rad17
AAA_15
AAA_28
PRK
AAA_18
nSTAND1
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
127783313
NCBI-ProteinID:
XP_052166526
LinkDB
All DBs
Position
8:2467700..2473606
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AA seq
1261 aa
AA seq
DB search
MSTVHDEDHSISSSQFDEMDESNSTIPVPSESSTDEKPFPFLGLLCYADAVDWLLMALGT
VGSIIHGMAFPVGYLLLGKALDAYGTNINDQEGMVHALYKVVPFVWYMAAATLPAGMVEI
SCWIYSSERQLARMRLAFLRSVLNQEVGAFDTDLTTAKIITGVTNHMSVIQDAIGEKLGH
FVASFSTFFAGIIIAFASCWEVALLSFLVIPLILVIGATYTKQMNGISLSRNAIVSEATS
IVEQTLSHIKTVFSFVGEKRAMRSFVWCMDNQYKLSKKEAVIKGIGLGLFQAVTFCSWAL
MVWIGAVAVTSRKATGGGTIAAIMSILFGAISITYAAPDLQTFNQAKAAGKEVFKVIKRK
PSISYEKHGSVLGKVHGEIKFRRVHFAYPSRQDKPILQGFSLSIPAGKVIALVGSSGCGK
STVISLLQRFYDPTSGSIFIDGHSIKKLDLESLRRNIASVSQEPSLFSGTIKDNLRIGKM
DANDDEITKAARTANVHSFISKLPNEYLTEVGERGVQLSGGQKQRIAIARAMLKDPPILL
LDEATSALDSESEKLVQDALEKAMSGRTVILIAHRMSTIVNADTIVVVENGKVAQTGTHQ
ELIEKSTFYSNVCSMQNIEKEAGKRVASSSDNVIEDEIDEVYDRQLSPKQGQQNKLEQLN
SKQPKQEVRKEIHPFFRLWYGLQKDDIAKILLGSSSAAISGISKPLFGYFIMTIGVAYYD
LDAKRKVSKYSLIFFTAGVITLASNIFQHYIYGVVGEKAMKNLREAIFSSVLRNELGWFE
KPKNGVGFLTSRIVSDTSTVKTIISDRMAVIVQCISSILIATVVSMYVNWRMGLVSWAVM
PCHFIGGLIQAKAAKGFYGDSAIAHQELVSLASEAASNIRTVASFVYEDEIIKKAELSLQ
EPMRVTKIASMKYGVVQGISLCLWNIAHAVALWYTTVLVQRKQASFENSIRSYQIFSLTV
PSITELWTLIPMVMSAIAVLNPAFEMLDRDTQIVPDRPENPSDGWLMGRTEFQDVSFNYP
SRPEVTILDGFSLVIEPGQRVALVGPSGAGKSSVLALLLRFYDPQRGRVLIDNKNIKDYN
LRWLRKQIGLVQQEPILFNSSIRDNISYGSEETSETEIIQAAMEANIHEFISSLPKGYDT
VVGEKGSQLSGGQKQRIAIARTLLKRPAILLLDEATSALDGESERVVMSSLGAKDWKDRN
EGSSKITSITVAHRLSTVINSDTIVVMERGKVVELGNHHTLITADDGVYSRLFHLQSNMK
D
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagtccatgatgaagaccactctatttcatcatctcaatttgatgaaatggat
gaaagtaatagcacaatcccagttccgtcagaatccagcaccgacgagaagccatttcca
ttcctcgggctgctttgctacgccgatgcggtagactggctcctcatggccctgggaact
gttggatctataattcatggcatggcattccccgtcggatatctccttcttgggaaagca
cttgatgcttatggaaccaacataaatgatcaggagggcatggtccatgcattgtataag
gtggttccgtttgtgtggtacatggcagcagctactcttcctgctggaatggtcgagatc
tcatgctggatatactcaagtgaaagacaattagcacgcatgcggctagcatttctgaga
tcagtacttaatcaagaggttggggccttcgacactgacttgaccactgcaaaaatcatc
accggagtaaccaaccacatgagtgtcatacaagatgcaattggtgagaagctcggtcat
ttcgttgcgagcttctccactttctttgctggtatcataattgcatttgccagctgctgg
gaagtcgcattgctctcctttctggtcattcctctgatcctcgtcattggagcaacatac
acgaaacagatgaatggcatatcgttatctcgtaatgctatagtctcagaagcaacatct
attgtagaacagactttgtcgcatattaagactgttttctcctttgttggggagaaacgg
gccatgagatcctttgtctggtgcatggataatcagtacaaactaagtaagaaggaggca
gtgataaaagggataggactgggattgttccaagctgtgaccttctgttcatgggcactg
atggtttggattggggcagtcgcagtaaccagccgaaaggcaacaggaggtggcacgata
gctgccatcatgagcatcctcttcggagcaatatcaattacttatgctgcaccagacctt
cagacctttaatcaagcaaaagctgcaggaaaagaagtattcaaggttatcaaaagaaag
ccatccattagttatgagaaacatggatcagtgctaggaaaggttcatggggagataaaa
ttccgtagggtgcatttcgcctatccatccaggcaggataagccaattctccaaggattc
tcattatccatccccgcaggcaaagtcattgcacttgtaggaagcagtggctgtgggaag
agcactgtgatctcactactccaaaggttctatgatccaacctcaggtagcattttcatt
gatggtcacagtatcaagaaacttgatctggaatccctccgaagaaacattgcttcagtc
tcccaggagccatcgctattttcaggcactatcaaggacaacttgaggattggtaaaatg
gatgcaaatgacgacgagataaccaaagcagcaagaacagctaatgtccattcatttata
tccaaacttccaaatgaatacttaacagaggtaggagaaaggggagtgcagttgtcggga
ggtcagaaacaacgaatagctattgcaagggcaatgctcaaggatccaccaatcctgctt
ctggatgaagcaacaagtgcccttgattcagagtcagaaaagctagttcaggatgcgctt
gagaaggccatgagtgggaggactgtcatattgatagcacacagaatgtctacaattgta
aatgccgacacaattgttgttgtggagaatggaaaggtagctcaaactggaactcatcaa
gagttgattgagaaaagcacattctactcaaatgtatgcagcatgcaaaatattgagaag
gaagctggaaagagggtcgcaagctcttctgataatgtcatagaagatgaaattgatgaa
gtgtacgacaggcagctctctccaaagcagggacaacagaacaaattggaacaactaaac
tctaagcaaccaaagcaagaggtcagaaaggaaatacatcctttctttagactttggtat
gggctgcagaaagacgacattgcaaagatactattagggtcatcatcagcagctatatct
gggatctcaaagcccttgtttggttacttcatcatgacaattggtgtggcatattatgat
ctagatgcaaaaaggaaagtcagcaagtattctttgattttcttcacagctggggtgatc
acgcttgccagtaacatcttccaacactatatttatggtgttgttggagaaaaggcaatg
aaaaacctcagggaggccatcttttcatctgttctccgaaatgagcttggctggtttgaa
aagccaaaaaatggtgtaggctttcttacctcacgcatcgtgagcgacacatcgacagtc
aagaccattatatctgatagaatggcagtcattgtgcaatgcatctcttcaattctgata
gcaacagtagtaagcatgtatgtcaattggaggatgggtttagtatcatgggcagtcatg
ccatgccatttcatcggtggccttattcaggccaaggcagccaaagggttctatggtgac
tctgctattgctcaccaggaacttgtctcccttgcttcagaggcagctagcaacatcaga
actgtggcatcctttgtatatgaggatgaaataatcaagaaagcagaattgtcgctgcaa
gaacccatgcgagttaccaagatcgcgagcatgaagtacggcgtagtccaagggatctca
ctctgcctttggaatattgcacatgcagtggcgctttggtacaccacagttctggttcag
aggaagcaggcttcatttgagaacagcataagatcataccagatattctcactcacagtg
ccttccataacagagctatggactctgatccccatggtcatgtcagccattgcagtactc
aatcctgcatttgaaatgcttgatagggacacacagattgtgccagacagaccagaaaat
ccaagtgatggctggctcatgggaagaactgagtttcaagatgtgagcttcaactatcca
tctagaccagaggtgaccattcttgatggcttcagtctagtcattgagcctggccaaaga
gtagcattggttggtccaagcggcgcgggaaaatcctctgtcctggcactactattgaga
ttctatgatcctcagagagggagagtactaatcgacaacaagaacataaaagactacaat
ctcagatggctcaggaaacagattgggctagtccaacaagaaccaatcttgttcaattca
tccatcagagataacattagctacggaagcgaagagacttcagagactgaaataattcag
gctgcaatggaggcgaacattcacgaattcatcagcagcctaccaaaagggtacgacacg
gttgttggggagaaaggaagccagctttcaggagggcagaaacagcggatagctattgca
agaactcttcttaagcgtccagccattcttcttcttgatgaggcaaccagcgcacttgat
ggtgaatctgagagagtggtgatgagttctttaggggccaaggactggaaggacagaaat
gagggatcaagcaagattacaagtatcacagtggcgcatagattgtccacggtcataaat
tcagacacgattgtcgtgatggagagaggcaaagtggttgaacttggtaatcaccacaca
ctgatcactgcagatgatggtgtctactcaagactgttccatttgcaaagcaacatgaaa
gattga
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integrated database retrieval system
