KEGG   Oryza glaberrima (African rice): 127783376
Entry
127783376         CDS       T08853                                 
Name
(RefSeq) THO complex subunit 7B-like isoform X1
  KO
K13176  THO complex subunit 7
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03013  Nucleocytoplasmic transport
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127783376
  09122 Translation
   03013 Nucleocytoplasmic transport
    127783376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127783376
   03041 Spliceosome [BR:ogl03041]
    127783376
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     127783376
Spliceosome [BR:ogl03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    127783376
SSDB
Motif
Pfam: THOC7 ArsR YwqH-like APG6_N TMEM120A-B
Other DBs
NCBI-GeneID: 127783376
NCBI-ProteinID: XP_052166600
UniProt: I1QFV5
LinkDB
Position
8:complement(2944523..2947172)
AA seq 242 aa
MLAKGRKVAGRGGDMSAHYAFGPQEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNISDCERLYKAFLQEINTFELPLLKSKAVVDANLREKESFNELQDEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKMISLQPPRSETEKLIADLEKEIANLEAENTA
CIRTLELRKKQFALLLHVVEELQISIDDEQRSIADELRAATEEQKMSIEEVSGGASDAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcttgccaaagggaggaaagttgctggaaggggcggagacatgtctgcacactatgca
tttgggccgcaggaagatgatgcgattattaaacataggcttctgaccaggacaacaact
accaggggtgaaccaccacttaagaagcttcagaagaagttcatgtcctttgccactgag
gttgagaaggatgcagacaacataagtgactgtgagaggctgtacaaggcctttttacag
gaaattaatacttttgagctgcctcttcttaaaagcaaggctgtcgttgatgcaaacctt
agggagaaggagagcttcaacgagctgcaggatgagattcagcgacaaatcttgcaagct
cagactgatattgaggatctcaagaagcaactggaacagagcaaaattgagaggcagcac
aaagaggagtgcgaagcaatcagaaaaatgatttctttgcagcctccacgatcagaaaca
gaaaagctcattgcggatcttgagaaggagattgctaatttggaggctgagaatactgca
tgtataaggaccctggaactaaggaagaagcagtttgctcttcttcttcatgtggtcgag
gaactgcagatctcgatcgatgatgagcagaggagcatagcagatgagctgagagctgcc
actgaagagcagaagatgagcatagaggaagttagcggcggtgcttcagatgccatggct
gtagattga

DBGET integrated database retrieval system