KEGG   Oryza glaberrima (African rice): 127783963
Entry
127783963         CDS       T08853                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127783963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ogl03019]
    127783963
   03036 Chromosome and associated proteins [BR:ogl03036]
    127783963
Messenger RNA biogenesis [BR:ogl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     127783963
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    127783963
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_DCAF12 Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR41 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 127783963
NCBI-ProteinID: XP_052167088
LinkDB
Position
1:23233781..23241763
AA seq 344 aa
MASFTAGGGGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQVRCWEIQPGGQ
CQAKASISHDQPVLCSAWKDDGTTVFSGGCDKQIKMWPLLSGGQPTVLSGHEAPVKELAW
IPQMNLLVSGSWDKTLRYWDVRQPQPAHVQQLPERCYALSLSYPLMVVGTADRNVIVFNM
QNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDGQQGKNFTFKCHRD
GNDIYAVNALNFHPVHHTFATSGSDGGFNFWDKDSKQRLKAFNKCPSPITCSTFNQDGSI
FAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKPRVNKK
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcgagctttaccgccggcggcggcggcgccaacaacaaccccaacaagtccctcgag
gtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaaccac
ctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggaggccaa
tgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatggaaggat
gatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgctgctc
tccggtgggcagcccacggttttatcagggcatgaagcaccggtcaaagagcttgcctgg
ataccacagatgaaccttcttgttagtgggagctgggacaagactctgaggtactgggat
gttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctctctca
cttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttcaatatg
cagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgt
cttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgagttggt
gttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcaccgtgat
ggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatacttttgcc
acttcgggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggcttaag
gctttcaataagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaata
tttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatccttctact
gcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagccccgt
gttaataagaagtag

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