Oryza glaberrima (African rice): 127783963
Help
Entry
127783963 CDS
T08853
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127783963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127783963
03036 Chromosome and associated proteins [BR:
ogl03036
]
127783963
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127783963
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127783963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
127783963
NCBI-ProteinID:
XP_052167088
LinkDB
All DBs
Position
1:23233781..23241763
Genome browser
AA seq
344 aa
AA seq
DB search
MASFTAGGGGANNNPNKSLEVNPAPGDSVSSLSFSPKANHLVATSWDNQVRCWEIQPGGQ
CQAKASISHDQPVLCSAWKDDGTTVFSGGCDKQIKMWPLLSGGQPTVLSGHEAPVKELAW
IPQMNLLVSGSWDKTLRYWDVRQPQPAHVQQLPERCYALSLSYPLMVVGTADRNVIVFNM
QNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDGQQGKNFTFKCHRD
GNDIYAVNALNFHPVHHTFATSGSDGGFNFWDKDSKQRLKAFNKCPSPITCSTFNQDGSI
FAYAVCYDWSKGAEKHNPSTAKTNIFLHSVQESEVKGKPRVNKK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttaccgccggcggcggcggcgccaacaacaaccccaacaagtccctcgag
gtgaatccggcgcccggggactcggtttccagcctcagcttcagtcccaaggcgaaccac
ctcgtcgccacatcatgggacaaccaggttcgttgctgggagatccagcctggaggccaa
tgccaagcgaaggcctcgatctcgcacgatcagccggtgctgtgctcggcatggaaggat
gatgggactactgttttttcgggaggttgtgataaacagattaagatgtggccgctgctc
tccggtgggcagcccacggttttatcagggcatgaagcaccggtcaaagagcttgcctgg
ataccacagatgaaccttcttgttagtgggagctgggacaagactctgaggtactgggat
gttcgacaacctcagccagcacatgttcagcaactacctgagcgctgttatgctctctca
cttagttatcctctcatggtggttggcactgctgatcgaaatgtaatagtcttcaatatg
cagaatccacaggctgaattcaagaggattgtgtcacctttaaaactccagacaaggtgt
cttgctgcatttcctgatcagcaagggtttctggttggatcgatagaaggacgagttggt
gttcatcatgttgatgatggtcaacaagggaaaaactttacatttaaatgtcaccgtgat
ggcaatgacatatacgctgttaacgcattgaactttcaccctgtgcaccatacttttgcc
acttcgggctctgatggaggtttcaacttttgggacaaggacagtaagcaaaggcttaag
gctttcaataagtgtccgtcacccatcacatgcagtacattcaatcaggatggctcaata
tttgcttatgcggtatgctatgattggagcaagggtgccgagaagcacaatccttctact
gcaaaaacaaatatctttctccatagtgtccaggaatctgaggtcaaaggaaagccccgt
gttaataagaagtag
DBGET
integrated database retrieval system