KEGG   Oryza glaberrima (African rice): 127784275
Entry
127784275         CDS       T08853                                 
Name
(RefSeq) DNA mismatch repair protein MLH1
  KO
K08734  DNA mismatch repair protein MLH1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    127784275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ogl03400]
    127784275
DNA repair and recombination proteins [BR:ogl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     127784275
SSDB
Motif
Pfam: Mlh1_C DNA_mis_repair HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 127784275
NCBI-ProteinID: XP_052167438
LinkDB
Position
1:38763847..38769746
AA seq 724 aa
MDEPSPRGGGCAGEPPRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVA
VKDGGLKLIQVSDDGHGIRFEDLAILCERHTTSKLSAYEDLQTIKSMGFRGEALASMTYV
GHVTVTTITEGQLHGYRVSYRDGVMENEPKPCAAVKGTQVMVENLFYNMVARKKTLQNSN
DDYPKIVDFISRFAVHHINVTFSCRKHGANRADVHSASTSSRLDAIRSVYGASVVRDLIE
IKVSDEDAADSIFKMDGYISNANYVAKKITMILFINDRLVDCTALKRAIEFVYSATLPQA
SKPFIYMSIHLPSEHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTTRIFQTQA
LNLSGIAQANPQKDKVSEASMGSGTKSQKIPVSQMVRTDPRNPSGRLHTYWHGQSSNLEK
KFDLVSVRNVVRSRRNQKDAGDLSSRHELLVEIDSSFHPGLLDIVKNCTYVGLADEAFAL
IQHNTRLYLVNVVNISKELMYQQALCRFGNFNAIQLSEPAPLQELLVMALKDDELMSDEK
DDEKLEIAEVNTEILKENAEMINEYFSIHIDQDGKLTRLPVVLDQYTPDMDRLPEFVLAL
GNDVTWDDEKECFRTVAAAVGNFYALHPPILPNPSGNGIHLYKKNRDSTADEHAENDLIS
DENDVDQELLAEAEVAWAQREWTIQHVLFPSMRLFLKPPKSMATDGTFVQVASLEKLYKI
FERC
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggacgagccttcgccgcgcggaggtgggtgcgccggggagccgccccgcatccggagg
ttggaggagtcggtggtgaaccgcatcgcggcgggggaggtgatccagcggccgtcgtcg
gcggtgaaggagctcatcgagaacagcctcgacgctggcgcctccagcgtctccgttgcg
gtgaaggacggtggcctcaagctcatccaggtctccgatgacggccatggcatcaggttt
gaggatttggcaatattgtgcgaaaggcatactacctcaaagttatctgcatacgaggat
ctgcagaccataaaatcgatggggttcagaggggaggctttggctagtatgacttatgtt
ggccatgttaccgtgacaacgataacagaaggccaattgcacggctacagggtttcttac
agagatggtgtaatggagaatgagcctaagccttgcgctgcggtgaaaggaactcaagtc
atggttgaaaatctattttacaacatggtagcccgcaagaaaacattgcagaactccaat
gatgactaccccaagatcgtagacttcatcagtcggtttgcagtccatcacatcaacgtt
accttctcttgcagaaagcatggagccaatagagcagatgttcatagtgcaagtacatcc
tcaaggttagatgctatcaggagtgtctatggggcttctgtcgttcgtgatctcatagaa
ataaaggtttcagatgaggatgctgcagattcaatcttcaagatggatggttacatctca
aatgcaaattatgtggcaaagaagattacaatgattcttttcataaatgataggcttgta
gactgtactgctttgaaaagagctattgaattcgtgtactctgcaacattgcctcaagca
tccaaacctttcatatacatgtccatacatcttccatcagaacacgtggatgttaatata
cacccaaccaagaaagaggttagccttttgaatcaagagcgtattattgaaacaataaga
aatgctattgaggaaaaactgatgaattctaatacaaccaggatattccaaactcaggca
ttaaacttatcagggattgctcaagctaacccacaaaaggataaggtttctgaggccagt
atgggttctggaacaaaatctcaaaaaattcctgtgagccaaatggtcagaacagatcca
cgcaatccatctggaagattgcacacctactggcacgggcaatcttcaaatcttgaaaag
aaatttgatcttgtatctgtaagaaatgttgtaagatcaaggagaaaccaaaaagatgct
ggtgatttgtcaagccgtcatgagctccttgtggaaatagattctagcttccatcctggc
cttttggacattgtcaagaactgcacatatgttggacttgccgatgaagcctttgctttg
atacaacacaatacccgcttataccttgtaaatgtggtaaatattagtaaagaacttatg
taccagcaagctttgtgccgttttgggaacttcaatgctattcagctcagtgaaccagct
ccacttcaggagttgctggtgatggcactgaaagacgatgaattgatgagtgatgaaaag
gatgatgagaaactggagattgcagaagtaaacactgagatactaaaagaaaatgctgag
atgattaatgagtacttttctattcacattgatcaagatggcaaattgacaagacttcct
gttgtactggaccagtacacccctgatatggaccgtcttccagaatttgtgttggcgtta
ggaaatgatgttacttgggatgatgagaaagagtgcttcagaacagtagctgctgctgta
ggaaacttctatgcacttcatcctccaatccttccaaatccatctgggaatggcattcat
ttatacaagaaaaatagagattcaacggctgatgaacatgctgagaatgatctaatatca
gatgaaaatgacgttgatcaagaactacttgcggaagcagaagtagcatgggcccaacgt
gagtggaccattcagcatgtcttgtttccatccatgcgacttttcctcaagcccccgaag
tcaatggcaacagatggaacgtttgtgcaggttgcttccttggagaaactctacaagatt
tttgaaaggtgttag

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