Oryza glaberrima (African rice): 127784317
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Entry
127784317 CDS
T08853
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127784317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127784317
03110 Chaperones and folding catalysts [BR:
ogl03110
]
127784317
03029 Mitochondrial biogenesis [BR:
ogl03029
]
127784317
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ogl04147
]
127784317
Enzymes [BR:
ogl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
127784317
Messenger RNA biogenesis [BR:
ogl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
127784317
Chaperones and folding catalysts [BR:
ogl03110
]
Heat shock proteins
HSP60 / Chaperonin
127784317
Mitochondrial biogenesis [BR:
ogl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
127784317
Exosome [BR:
ogl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127784317
Exosomal proteins of other body fluids (saliva and urine)
127784317
Exosomal proteins of breast cancer cells
127784317
Exosomal proteins of colorectal cancer cells
127784317
Exosomal proteins of bladder cancer cells
127784317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PriC
Motif
Other DBs
NCBI-GeneID:
127784317
NCBI-ProteinID:
XP_052167496
UniProt:
I1QRB5
LinkDB
All DBs
Position
9:21224932..21229059
Genome browser
AA seq
584 aa
AA seq
DB search
MSLTTVSFSYPAKPLPKWPCTLPKPPPRARCRFVVRADVKVISSGEACRRGLAAGIDKLA
DAVAVTLGPKGRNVVIDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEIASKTNSSV
GDGTTTAIILAREIINLGLLAVATGANPVALRKGIDKAVHELIGILKTKCIPVSTKEDIK
AVASISAGNDEYVGDLIADALEKIGPDGIIKIESSSSIYTSVEVQEGMKIDKGYISPHFI
TNQDKAIVEFENARVLLTDQRVDDVQEILPLLEKTTQLSVPLLIIAEDVSHTVYSTLVLN
KLNGLLNVAVVKCPGLGDEKKAILQDIAIMTGADFFASDLGWCLQGATSDQLGMAQKITI
TSDTTTIIAHPSMRPEIEARIQQLKKDLEETTSAYLKERFSARIAKLSRGIAAIKVGAAT
EAELEDRKLRAEDAKNATFAAISEGITPGGGVTYVQLSKYIPSIMELVDDSEEKIGVNIV
GKALLVPAMTIARNAGADGPAVVEKLLASEWRVGYNAMTDQFEDLVDAGVVDPCRVARCV
LQNSASIAGLILMTQAMMFDKIKKKKSPIPQIPGIPPLQINQNA
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaccaccgtttctttctcctaccccgccaagccgcttcccaaatggccgtgc
acgctgcctaagccgccgccgagggctcgctgccgttttgtggtgcgggcggacgtcaag
gtgatctcctccggtgaggcctgccgccgtgggctcgccgccggcatcgacaagctcgcc
gacgccgtcgcggtcactctaggccccaaaggcaggaatgttgttattgaccaagacgat
gttcctaaagtaatcaatgatggtatcacaattgccaaggctatagagctcccaaatgct
gttgagcatgcaggtgccatgttacttcaagagatagcatccaagacgaatagttctgtt
ggcgatggaacaacaactgctattattttggcaagagaaattatcaatcttgggttgttg
gcagttgccactggtgctaatccagttgccctgagaaagggtattgacaaagctgttcat
gaacttattgggatcttgaagactaaatgtatccctgtaagtacaaaggaggacataaaa
gctgttgcttcaatatcagctggcaatgatgaatatgttggcgatctcattgctgatgca
ttggagaagataggtcctgatggaataattaaaattgagtcctcatcttcaatatatact
tcagttgaggtgcaagaaggaatgaagatagacaaaggttatatctctccacatttcatc
acaaatcaagacaaagcaattgttgaatttgaaaatgctagggtacttttaactgatcag
cgggtggatgatgtccaagagatacttcctttgctagagaagaccacacagttgagtgtc
cctttgttgattattgctgaggatgtttcgcatacggtgtattcaactcttgttcttaac
aaactgaatggactgctaaatgttgctgttgttaaatgtcctggtttgggagatgaaaag
aaggctattctccaagatattgctattatgacaggtgcagatttctttgctagtgacctt
ggctggtgtcttcaaggtgctacttctgatcagctaggtatggctcagaagatcactata
acaagtgatactactactatcattgcacatccttcgatgagaccagaaattgaggccaga
attcagcaacttaagaaagatctagaggagacaacaagtgcctatctaaaagaaaggttt
tcagctcgtatcgctaaactctcaagaggtattgcagctatcaaggttggtgcagctact
gaagctgaactcgaggataggaaactgagagcagaggatgcaaaaaatgcaacctttgca
gccattagcgaaggcataactcctggtggtggtgtgacgtatgttcaattatcaaagtat
attcccagtatcatggaacttgtagatgactctgaagagaagattggtgtaaatatagtt
gggaaggcacttctcgtccctgctatgacgattgctcgcaatgctggggcagatggtcca
gctgttgtagagaagcttcttgctagtgaatggcgtgttggatacaatgcaatgactgac
caatttgaagaccttgttgatgctggtgtggtagacccatgcagggttgcaagatgtgtg
cttcaaaactctgcctctattgcaggacttattttaatgacgcaagctatgatgttcgac
aaaataaagaagaaaaagtcccccattcctcaaattcctggcatcccaccgttgcagata
aatcaaaatgcttag
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