Oryza glaberrima (African rice): 127784319
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Entry
127784319 CDS
T08853
Name
(RefSeq) nuclear pore complex protein NUP58-like
KO
K14307
nucleoporin p58/p45
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127784319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogl03019
]
127784319
Messenger RNA biogenesis [BR:
ogl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127784319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF7217
YjbH
Motif
Other DBs
NCBI-GeneID:
127784319
NCBI-ProteinID:
XP_052167498
UniProt:
I1QPH2
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Position
9:complement(16018407..16026807)
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AA seq
471 aa
AA seq
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MAFSFASPAPQNPFQTPAQAPSLSPSPFQFNLQQPQQQQQQPPPQQQAAPAAQPQQQQQQ
QQLMLYTTDGKPAGYNTKWEELHAESQKALLQIEDKIREYRDESERLDQCSRLHDSSIST
VNFENDASEIAQELGGTTTMMEREKASVQELMTVVNEMMRNTEFAIRSYMMLRPRFIRPG
AGANGGGSNPSGPAGAQSNQPVALAPTIDFYSGIPKRPSHFMQQTINRFEKYLGECCKWI
AELEQLVQMENNKRQSASLESLPKVMSNVHDYFIYVASKVENLHQYVESLKTEYLHEQRR
LGNASDPFLEANRREAAKQEAAARRVHPTLHLPAPVQPTTQIAGTVTSQPQQSLIPSGAT
SSSAFPSFSTPASAPSSSSLFSTPTTPTLSSNLFGTSGSAQLSTPFGTVSTPTLGSTPAP
SGFGNTTPSFVSTPALGGTSLFSTPFGGGATASGSSFGGTSKVRSKPRGRR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcgttctccttcgcctcaccggcgccgcagaatccgttccagacgccggcgcaggcc
ccgtccctgtcgccttcgccgtttcagttcaacctgcagcagccgcagcagcagcagcag
cagccgccgccacagcaacaggcggcgccggccgcgcaaccgcagcagcagcagcagcag
cagcagctgatgctatatacgactgacgggaagcccgcggggtacaacacgaagtgggag
gagcttcacgccgagtcgcagaaggcgctgctccagatcgaggataaaataagggagtac
agggacgagagcgagaggttggatcagtgttctcgccttcatgactcttcaatctcaact
gtcaattttgagaatgatgcaagtgaaattgctcaggaacttggagggacaaccaccatg
atggaaagagagaaggcttccgtacaagagttaatgactgttgtgaatgaaatgatgcga
aacacagaatttgctattaggtcatatatgatgctgagaccaagatttatccgtccaggt
gctggagcaaatggtggtggctcaaatccttctggtcctgctggagctcagtccaatcag
ccagtagcattggctccaaccattgatttctatagtggtatcccaaagcggccttcccat
tttatgcaacagactatcaacaggtttgagaagtatcttggagaatgctgcaagtggatc
gcggagctagagcagcttgttcaaatggagaacaataaaaggcaatcagcctcattagaa
tctctaccgaaggttatgtcgaatgtgcatgattatttcatctatgttgcttctaaggtg
gaaaatcttcatcaatatgttgagtcattgaaaactgaatatctacatgagcagcggcga
ttgggtaatgccagtgatccatttttagaggcaaatagacgagaagcggctaaacaagaa
gcagctgccagaagggtacatccaacattgcatttgcctgctcctgtacagcccacaact
caaattgctggaacagtgacgagtcaaccacagcaatcattgattccttctggagcgact
tcttcaagtgcttttccatcattcagcactccagcttccgctccatcttcttcaagtctc
ttttcaactccaacaactccaactctatccagcaacctttttggtacatctggatcagcc
cagctgtccacaccatttgggacagtctctactccgacgcttggatcaacgccggctcca
tctggatttgggaatacaactccatcttttgtttcaacgcccgctttaggtggaacctca
ctgttttctacgccgttcggaggtggagctacagcttcaggatccagctttggtggtaca
tctaaagtgcggtcaaaacctcggggccgacgctag
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