KEGG   Oryza glaberrima (African rice): 127784366
Entry
127784366         CDS       T08853                                 
Name
(RefSeq) splicing factor U2af small subunit A
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127784366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ogl03041]
    127784366
Spliceosome [BR:ogl03041]
 Complex A
  U2 snRNP components
   U2 related factors
    127784366
 Complex B
    127784366
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_DUS3L RBD_AKAP-17A Pns11_12
Other DBs
NCBI-GeneID: 127784366
NCBI-ProteinID: XP_052167564
LinkDB
Position
9:17843208..17844915
AA seq 282 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNKPSVSPTLLLSNMYLRPDMITP
GIDAQGNPIDPEKIQADFEDFYEDIFEELSKYGEIESLHVCDNFADHMIGNVYVQFREED
QAARALQALTGRYYSGRPIIVEFSPVSDFREATCRQYEENSCNRGGYCNFMHVKEIGRDL
RKRLFGHLHRSRRSHSHGRSRSPSPYHYRRDYDRRSSSRSRDRDDYYRGGSRRSSERHRS
SYDSDGSRRRHRSRTRSPVRDGSEERRAQIEQWNREREAAQV
NT seq 849 nt   +upstreamnt  +downstreamnt
atggccgagcacctcgcttccatctttggcacggagaaggaccgcgtgaactgccccttc
tacttcaagatcggcgcgtgccgccatggcgaccgatgctcccgcctgcacaacaagccg
tcggtctcgccgacgctgctgctctccaacatgtacctgcgtccggacatgatcacccct
ggaattgatgctcagggcaaccccatcgaccctgagaagatccaggccgacttcgaggat
ttctacgaggacatctttgaggaactcagcaagtacggcgagatcgagagcctccacgtg
tgtgacaacttcgccgaccacatgatcggcaatgtgtatgttcaattcagggaggaggat
caggccgccagagcgctgcaggcgctgacggggcggtattactccggccgccctatcatt
gtcgagttctcgccggtgtccgatttccgggaggccacctgccggcaatatgaagagaac
agctgcaaccgtggtgggtactgcaacttcatgcacgtcaaggagatcggcagagacctg
aggaagaggttgtttgggcacctgcataggtcccggagaagccatagccatggccggagc
cgcagcccgagcccgtaccattaccggagggactatgatcggaggagctcatcgcggtcc
agggaccgcgacgattactaccgtggaggtagccggaggagcagcgagaggcaccgcagc
agctacgacagcgatggcagcaggcggcggcacaggtccaggactaggagtcctgtcagg
gatggtagcgaggagaggagagctcaaattgagcagtggaaccgtgaaagggaggctgca
caagtgtga

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