Oryza glaberrima (African rice): 127784368
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Entry
127784368 CDS
T08853
Name
(RefSeq) protein HIRA isoform X1
KO
K11293
protein HIRA/HIR1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127784368
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127784368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
Hira
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
127784368
NCBI-ProteinID:
XP_052167566
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All DBs
Position
9:21509815..21514640
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AA seq
1010 aa
AA seq
DB search
MITEKPSWIRHEGLQIFSIDIQPGGIRFATGGGDQKIRIWSMKSVAKDNDSDDSSQRLLA
TIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHERKAGTGTSEFGSGEPPDVENWKVVMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVVVVKFNHSMFRKHLSSGQDAKAAPAGWANGASKASS
KEHQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VATFHFEAKELGYRLSDAELDELKKNRYGDVRGRQSNIAESPAQLLLEEASAKQSASKKV
SSVQQFQSPPKVSTDAPNPSTSVPNQKAPEALPEDEKKTAGSTADDINKAPRLSSPVKQR
EYRRPDGRKRIIPEAVGFPSNQDMSNRSQNQGVDFSSLDQRMILGENGTRPSYSASGNCN
NCGVRERSGITARTNISESLVIQKASAGAGSDGRLSIEQSGSVVPGSLASCSSLSIHVFN
KKDNEDSLPVRLEAKPVERSAGDMIGLGGAFSTKETEITCTRGTETLWSDRISAKVTVLA
GNANFWAVGCEDGCLQVYTKCGRRAMPAMMMGSAAVFIDCDECWKLLLVTRRGLMYIWDL
YTRTCVLHDSLASLVTSPDEAAGKDTGKYFICSVNLNFCASKLMLAKMACSCKLILLCYM
TGTVKVISAKFSRCGSPLVVLASRHAFLYDTGLKCWLRIADDCFPASNFASSFSSTQGGE
LGKLQIDIGKFMARKPIWSRVTDDGVQTRSHLETQLAASLALKSPQEYRQCLLSYIRFLA
READESRLREVCESFLGPPMGMVDAASSADLKNPSWDPDVLGMKKHKLLREDILPSMATN
RKVQRLLNEFMDLLSEYEAAETNVEQMDVTPTPPPAAAAAATEGNNNGAS
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgattacggagaagccgagctggattcgccacgagggcctgcagatcttctctatcgac
atccagccgggcggcatccgcttcgccaccggcggcggcgaccagaagattcgcatatgg
agcatgaaatcagtggccaaagacaatgacagtgatgattccagccaaaggttgctggct
acaattcgagaccattttggaacagtaaactgtgtgagatgggcccatcatggccgctat
cttgcttcaggatcggacgatcaagttatccaaattcatgaaagaaaagctggcactgga
acatctgaatttggaagtggagaacctccagatgtagaaaactggaaggttgttatgacc
ttaagagggcatactgccgatgtggttgaccttaattggtcccctgatgactcgacattg
gctagcggcagtttggataatactgttcacatatggagcatggccaatggcatatgcact
gctgtcttgcgagggcattccagtttagttaaaggtgttacatgggatcctatcggttct
ttcatcgcaagccaatcagatgacaagactgttatcatatggcgtacgagtgactggagt
cttgctcacaggacagaaggccattggtcaaaatcgcttggttcgacattttttaggcga
cttgcttggtctccctgtggccacttcataaccacaactcatggttttcagaaacctagg
cactcagcccctgtgcttgaacggggtgaatggtcagcaacctttgattttctggggcat
aacgcacctgttgtagtggttaagtttaaccactcaatgttccgtaagcatttatcttct
ggccaagacgcaaaggctgcaccagctggatgggccaatggagcatcaaaagcatcatct
aaagaacatcaaccatataatgttattgctattgggagtcaggaccgaactattactgtc
tggacgacagcgagtgcccggccattgtttgttgccaagcatttcttcactcaaagtgtg
gttgatttatcttggagtcctgatggctattcactttttgcctgctctttggatggttca
gttgctacctttcactttgaagcaaaggagcttggatacaggttaagtgatgctgaactg
gatgaattgaagaagaatagatatggcgatgttagagggaggcaatcaaatatagctgaa
agccctgctcagttactgctagaagaagcatcggccaaacaatctgcaagcaaaaaggtt
tccagtgtccagcaatttcaatcaccccccaaagtttctacagatgcacctaacccgtct
acaagcgttccaaatcagaaagctcctgaagctttacctgaagatgagaagaaaactgca
ggttccactgctgatgacataaataaagcacctcgtttatctagtccagtgaaacaaaga
gaataccggcgtcctgatggccggaaaaggattattccagaggcagttggatttccttcc
aaccaggatatgtccaaccgttctcagaatcaaggtgtggatttttcatccctggatcag
cgaatgatccttggagagaatggaacaagaccatcttatagtgctagcggtaactgtaat
aattgtggagttagggaacgctctggcattactgcaagaactaacattagtgagagtctt
gtaatccaaaaagcttcagctggtgctggcagtgatggaaggttgagcatagaacagtct
ggatctgtagttccaggctcattggcctcttgctcttcactttctatccatgtattcaat
aagaaagacaatgaggattctttaccggtccgccttgaagcaaagcctgtagaacgttct
gcaggagacatgattgggcttggtggtgctttttcaacaaaagaaactgagattacatgt
acaagaggaacagaaactctttggtcagatcgcatctctgccaaggtgactgtcttggct
ggtaatgcgaatttctgggcagttggctgtgaagatggttgcctgcaggtttacacaaaa
tgtggaaggcgagcaatgccagcaatgatgatgggatcagcagctgtttttatagactgt
gatgagtgttggaaattgcttcttgtaacaaggaggggtttgatgtacatatgggacctc
tataccaggacttgcgttttgcatgattctttggcttctttggtaacatctccagatgag
gcagctggaaaagataccggtaaatatttcatatgtagtgttaatctgaacttttgtgca
tctaaattgatgttggccaaaatggcttgttcttgcaagttgatcttgctttgttatatg
acaggtacagtaaaggttatatctgctaaattttcaagatgtggctcgcccttagttgtg
cttgccagtcgccatgcttttctttatgacaccggcctgaaatgctggctaaggatagct
gatgattgctttccagcatcaaattttgctagctcatttagttctactcaaggtggagag
ctaggcaagttgcagatcgatataggaaaattcatggctagaaagcctatttggagcagg
gttaccgatgatggggtgcagacacgctcccatttagagacccagctggcagcttcattg
gctttgaagtctccacaggaatatcgccaatgcctcttatcctacataagatttctggca
agagaggcagatgaatctcgtctacgtgaagtttgtgagagctttcttggtcctccgatg
ggcatggttgacgctgcatcatctgctgatttgaaaaatccatcatgggatcctgatgtt
cttggaatgaagaaacacaaactcctaagggaagatatactaccttccatggctacgaac
cgcaaggtccaacggctgttaaacgaattcatggacctcctttcggagtacgaggctgct
gagacaaacgtcgagcaaatggacgtgacaccaacaccaccaccagcagcagcagcagca
gcaacagaaggcaacaataatggtgcctcatag
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