KEGG   Oryza glaberrima (African rice): 127784368
Entry
127784368         CDS       T08853                                 
Name
(RefSeq) protein HIRA isoform X1
  KO
K11293  protein HIRA/HIR1
Organism
ogl  Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ogl03036]
    127784368
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     127784368
SSDB
Motif
Pfam: Beta-prop_CAF1B_HIR1 Hira WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_IFT122_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 127784368
NCBI-ProteinID: XP_052167566
LinkDB
Position
9:21509815..21514640
AA seq 1010 aa
MITEKPSWIRHEGLQIFSIDIQPGGIRFATGGGDQKIRIWSMKSVAKDNDSDDSSQRLLA
TIRDHFGTVNCVRWAHHGRYLASGSDDQVIQIHERKAGTGTSEFGSGEPPDVENWKVVMT
LRGHTADVVDLNWSPDDSTLASGSLDNTVHIWSMANGICTAVLRGHSSLVKGVTWDPIGS
FIASQSDDKTVIIWRTSDWSLAHRTEGHWSKSLGSTFFRRLAWSPCGHFITTTHGFQKPR
HSAPVLERGEWSATFDFLGHNAPVVVVKFNHSMFRKHLSSGQDAKAAPAGWANGASKASS
KEHQPYNVIAIGSQDRTITVWTTASARPLFVAKHFFTQSVVDLSWSPDGYSLFACSLDGS
VATFHFEAKELGYRLSDAELDELKKNRYGDVRGRQSNIAESPAQLLLEEASAKQSASKKV
SSVQQFQSPPKVSTDAPNPSTSVPNQKAPEALPEDEKKTAGSTADDINKAPRLSSPVKQR
EYRRPDGRKRIIPEAVGFPSNQDMSNRSQNQGVDFSSLDQRMILGENGTRPSYSASGNCN
NCGVRERSGITARTNISESLVIQKASAGAGSDGRLSIEQSGSVVPGSLASCSSLSIHVFN
KKDNEDSLPVRLEAKPVERSAGDMIGLGGAFSTKETEITCTRGTETLWSDRISAKVTVLA
GNANFWAVGCEDGCLQVYTKCGRRAMPAMMMGSAAVFIDCDECWKLLLVTRRGLMYIWDL
YTRTCVLHDSLASLVTSPDEAAGKDTGKYFICSVNLNFCASKLMLAKMACSCKLILLCYM
TGTVKVISAKFSRCGSPLVVLASRHAFLYDTGLKCWLRIADDCFPASNFASSFSSTQGGE
LGKLQIDIGKFMARKPIWSRVTDDGVQTRSHLETQLAASLALKSPQEYRQCLLSYIRFLA
READESRLREVCESFLGPPMGMVDAASSADLKNPSWDPDVLGMKKHKLLREDILPSMATN
RKVQRLLNEFMDLLSEYEAAETNVEQMDVTPTPPPAAAAAATEGNNNGAS
NT seq 3033 nt   +upstreamnt  +downstreamnt
atgattacggagaagccgagctggattcgccacgagggcctgcagatcttctctatcgac
atccagccgggcggcatccgcttcgccaccggcggcggcgaccagaagattcgcatatgg
agcatgaaatcagtggccaaagacaatgacagtgatgattccagccaaaggttgctggct
acaattcgagaccattttggaacagtaaactgtgtgagatgggcccatcatggccgctat
cttgcttcaggatcggacgatcaagttatccaaattcatgaaagaaaagctggcactgga
acatctgaatttggaagtggagaacctccagatgtagaaaactggaaggttgttatgacc
ttaagagggcatactgccgatgtggttgaccttaattggtcccctgatgactcgacattg
gctagcggcagtttggataatactgttcacatatggagcatggccaatggcatatgcact
gctgtcttgcgagggcattccagtttagttaaaggtgttacatgggatcctatcggttct
ttcatcgcaagccaatcagatgacaagactgttatcatatggcgtacgagtgactggagt
cttgctcacaggacagaaggccattggtcaaaatcgcttggttcgacattttttaggcga
cttgcttggtctccctgtggccacttcataaccacaactcatggttttcagaaacctagg
cactcagcccctgtgcttgaacggggtgaatggtcagcaacctttgattttctggggcat
aacgcacctgttgtagtggttaagtttaaccactcaatgttccgtaagcatttatcttct
ggccaagacgcaaaggctgcaccagctggatgggccaatggagcatcaaaagcatcatct
aaagaacatcaaccatataatgttattgctattgggagtcaggaccgaactattactgtc
tggacgacagcgagtgcccggccattgtttgttgccaagcatttcttcactcaaagtgtg
gttgatttatcttggagtcctgatggctattcactttttgcctgctctttggatggttca
gttgctacctttcactttgaagcaaaggagcttggatacaggttaagtgatgctgaactg
gatgaattgaagaagaatagatatggcgatgttagagggaggcaatcaaatatagctgaa
agccctgctcagttactgctagaagaagcatcggccaaacaatctgcaagcaaaaaggtt
tccagtgtccagcaatttcaatcaccccccaaagtttctacagatgcacctaacccgtct
acaagcgttccaaatcagaaagctcctgaagctttacctgaagatgagaagaaaactgca
ggttccactgctgatgacataaataaagcacctcgtttatctagtccagtgaaacaaaga
gaataccggcgtcctgatggccggaaaaggattattccagaggcagttggatttccttcc
aaccaggatatgtccaaccgttctcagaatcaaggtgtggatttttcatccctggatcag
cgaatgatccttggagagaatggaacaagaccatcttatagtgctagcggtaactgtaat
aattgtggagttagggaacgctctggcattactgcaagaactaacattagtgagagtctt
gtaatccaaaaagcttcagctggtgctggcagtgatggaaggttgagcatagaacagtct
ggatctgtagttccaggctcattggcctcttgctcttcactttctatccatgtattcaat
aagaaagacaatgaggattctttaccggtccgccttgaagcaaagcctgtagaacgttct
gcaggagacatgattgggcttggtggtgctttttcaacaaaagaaactgagattacatgt
acaagaggaacagaaactctttggtcagatcgcatctctgccaaggtgactgtcttggct
ggtaatgcgaatttctgggcagttggctgtgaagatggttgcctgcaggtttacacaaaa
tgtggaaggcgagcaatgccagcaatgatgatgggatcagcagctgtttttatagactgt
gatgagtgttggaaattgcttcttgtaacaaggaggggtttgatgtacatatgggacctc
tataccaggacttgcgttttgcatgattctttggcttctttggtaacatctccagatgag
gcagctggaaaagataccggtaaatatttcatatgtagtgttaatctgaacttttgtgca
tctaaattgatgttggccaaaatggcttgttcttgcaagttgatcttgctttgttatatg
acaggtacagtaaaggttatatctgctaaattttcaagatgtggctcgcccttagttgtg
cttgccagtcgccatgcttttctttatgacaccggcctgaaatgctggctaaggatagct
gatgattgctttccagcatcaaattttgctagctcatttagttctactcaaggtggagag
ctaggcaagttgcagatcgatataggaaaattcatggctagaaagcctatttggagcagg
gttaccgatgatggggtgcagacacgctcccatttagagacccagctggcagcttcattg
gctttgaagtctccacaggaatatcgccaatgcctcttatcctacataagatttctggca
agagaggcagatgaatctcgtctacgtgaagtttgtgagagctttcttggtcctccgatg
ggcatggttgacgctgcatcatctgctgatttgaaaaatccatcatgggatcctgatgtt
cttggaatgaagaaacacaaactcctaagggaagatatactaccttccatggctacgaac
cgcaaggtccaacggctgttaaacgaattcatggacctcctttcggagtacgaggctgct
gagacaaacgtcgagcaaatggacgtgacaccaacaccaccaccagcagcagcagcagca
gcaacagaaggcaacaataatggtgcctcatag

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