Oryza glaberrima (African rice): 127784488
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Entry
127784488 CDS
T08853
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ogl03400
]
127784488
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
127784488
DNA repair and recombination proteins [BR:
ogl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
127784488
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
127784488
NCBI-ProteinID:
XP_052167767
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Position
9:complement(19851541..19856646)
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AA seq
637 aa
AA seq
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MVKIVTYNVNGLRPRVAQHGSLRRLLDALDADIICFQETKLSRQDLSGDVIMAEGYEAFI
SCNRSSKGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFTGLQETAKNSETIGDFVLVT
PVEEEGLGEVTKEELLKVDNEGRCVITDHGHFVLFNIYGPAVEEDDIERVRFKLLFYKIL
QRRWEHLLALGKRVFVVGDLNIAPSSIDRCDAQPGFEKQTFRKWLRSMLREHGGPFFDAF
RSKHPERVGAYTCFNQKVGAEVYNYGSRIDHILISGACFHHCGSVDDHSIFPCHVEECEI
MDHFRRGNSENMSMWKGGRSSKLEGSDHIPVYIVLNEIPELPVHNTPSSAARYLPEIRGR
QQSIVSFLRKGMIYEHKDAMSMDRADESCCGGGLESKAIYKEEPPTDIAKFSKGNDLHSV
IKRKTRDQLLNEGSSGNSHNSTAALLATQSRKASFSCSKAVSNKKNKHNLSSQPTIKSFF
QQPKSKPGDSSTNSIVTPPDTLHGMDELHDPKNDCLPESIQCTTPATKDQGNSDVPCSLS
TDKCNEATLEWQRIQQRMKMTLPLCKGHHEPCIPRSVKKGSNIGRLFYVCARAQVFNFRI
NCSIHIRGTIIKGPASNQEANCGHFQWATVKSKEKRR
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggcgcagcatggc
tcgctccgccgcctcctcgacgccctcgacgccgacatcatctgcttccaggagacaaaa
ttgtcgaggcaggacttgtcgggggatgtcatcatggctgagggatacgaggcttttatt
tcatgcaatcgttcatcgaaagggcgtggagcttactctggtgttgccacgttttgccgg
gtaacatcagccttttccagtcaagaggttgctttaccagtagcagctgaggaaggcttt
actggattgcaagagactgcaaagaacagtgaaactattggggattttgttcttgtaact
cctgtggaagaggaaggtcttggtgaagtaacaaaagaagagctgctcaaggtggacaat
gaaggacgttgtgtaattacagatcatggacattttgttctttttaatatatatggccca
gctgttgaagaagatgatatagaacgagttcgctttaagctactattttacaagatacta
cagagaagatgggaacatttgttggctcttgggaaaagagttttcgttgttggtgatttg
aatattgcaccttcttcaatagataggtgtgatgcccaacctggattcgagaagcaaacg
tttcggaaatggttgagatccatgctgagagaacatggaggtccattttttgatgctttc
cgatcaaaacaccctgaaagagtgggagcttatacctgttttaatcaaaaagttggagct
gaagtatacaattatggttctagaattgatcacattctcatttctggtgcctgcttccat
cactgcggttctgtggatgaccacagcatctttccctgccatgtggaagaatgtgaaatt
atggatcatttcagaagagggaatagcgaaaatatgtcaatgtggaaaggagggagaagt
agtaagctagaaggatcagatcatattccagtttatattgtgctgaatgagatacctgaa
cttccagttcataacactccttcatcagctgctagatatcttcctgaaatccgtggacgg
caacagagcatagtatcattcctaaggaaaggcatgatttatgaacataaagatgccatg
tccatggatagagcagatgaaagctgctgtggtggtggcttggaaagcaaagctatatat
aaggaagaaccaccaactgatatagccaaattttccaaaggtaacgaccttcatagtgtc
atcaagcggaaaactcgtgatcaattgttaaatgaaggttcaagtggcaactcccataat
agcactgcagcattactggcaacacaaagtagaaaagcttccttttcttgcagcaaggct
gtgtccaacaagaaaaacaaacataacttgtcttcccaacctacgatcaagtcatttttt
caacaaccaaagtcaaagccaggagatagcagtaccaatagcatagttactccaccagat
actttgcatggtatggatgaattacatgatccaaagaatgactgtctgccagaaagcatc
cagtgtacaactccagcaaccaaagatcagggtaactcagatgtaccctgctcgctttca
acagataaatgcaatgaagcaacactggagtggcaaagaatacagcagagaatgaagatg
accctaccactctgcaaaggacaccatgaaccttgcattccaaggtctgtgaagaaaggc
tctaatattggtcgcctattctatgtctgtgcccgtgctcaggtatttaacttcagaatc
aactgctcaattcacatccgaggaacaatcataaagggacctgcatcaaaccaagaagca
aattgtggtcactttcagtgggccactgttaagtctaaagagaaacgccggtga
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