Oryza glaberrima (African rice): 127784546
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Entry
127784546 CDS
T08853
Name
(RefSeq) protein ENHANCER OF LHP1 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127784546
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
127784546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
EIF3I
eIF2A
Ctf4_C
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WD_LRWD1
Tricorn_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_ELP1_1st
Beta-prop_EIPR1
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
127784546
NCBI-ProteinID:
XP_052167833
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All DBs
Position
9:2608894..2615284
Genome browser
AA seq
1125 aa
AA seq
DB search
MIFQLRNAIVKHIFLLSLFLKISLPYLRHCGREIRCIFPAVLHQKLPAKRPFPRGGTRQN
PPKCLQPKPHPAYRQSLETPNKFLNTRRHHSFSLVGEESLVVVVGVTMKGRAVKLREAHK
AGSPVFCSVAWGQGGQHVVTASAADVAILIHDAAAVAAAGGRSSGSAAAAALSTIRLHKD
GVTALAVAPGSGASLASGSIDHSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAA
GDDDGIKLIATIDNTISKVLKGHKGSVTGLSFDPRNDYLASIDTFGTVIFWDLCTGTEAR
SLKRIAPTFGSDHSINNALCWSPDGQFLAVPGLRNNVVMYDKDTGEEVFTLKGEHEQPVC
SLCWSPNGRYLVTAGLDKQVLIWDVKSKQDVERQKFDERICSLAWKPEGNAVAVIDVTGR
FGIWESVIPSTLKSPTEGAPDLNSTKVPLFDDEDDEERPSTSGGLDDDDDDESLGELGPF
NHKRLRRKSTYHDHSNGDSEDEDLILQMESRKRMKDTHRDNKEVADKAIGDSATSVRLVT
ARMQTAFQPGSTPPQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRVPSMTDY
FGFTMAALNESGSVFANPCKGDKNMSTLMYRPFSSWAGNSEWSMRFEGEEVKAVAVGAGW
VAAVTTLNFLRIFTEGGLQMHILSVGGPVVTAAGHGDQLAIVSHASDCLSSGDQVLDVKV
LKISECAQSLSSRFVLTPASKLSWFGFSENGELSSFDSKGILRVFSGQFGGSWIPIFSSI
KARKSEDESHWVVGLDANNIFCILCKSPESYPQVMPKPVLTILELSFPLASSDLGANSLE
TEFMMRKLHLSQIQKKIEEMAALGLDTIALDDEAFNMEAALDRCILRLISSCCNGDKLVR
ATELAKLLTLEKSMKGALMLVTRLKLPILQERFSAILEEMMLNNAKIANTSGVFSNSNTN
YSPSPALSTQAVPPAKVVQNGNSLKLPTLPKLNPAAQRSNPTESNKAELEQADNLKEIST
KVSPAQTPLVKIPKNSEMGVKTKKDNDGASHATTVDQNPKGGSGQVGLKNKSVDSCNGVQ
PQRPVNPFAKSSSSKEQPSSLFDSIKKTKVENEKVDKANSKKVKV
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgatatttcagctaagaaatgcgatagttaaacatatattccttttgagtttatttttg
aaaatatccctaccttacctccgccactgcggccgtgaaattcggtgtatttttcccgcg
gtactccaccaaaagcttcccgccaaacgtcctttcccgcgcggggggacgcgccaaaac
ccaccaaaatgtctgcaaccaaaaccccaccccgcgtatcgtcaatctctggaaacccct
aacaaattcctgaacacccgccgccaccatagcttcagcctcgtgggtgaagaatctctc
gtcgtcgtcgtcggtgtcaccatgaaagggcgcgcggtgaagctccgggaggcgcacaag
gccggctcgccagtcttctgctccgttgcgtggggccaaggcgggcagcatgtcgtcacc
gcatccgccgccgacgtggccatcctcatccatgacgccgctgcggtcgccgccgccggt
ggccggagctcgggctccgcggctgcggcggcgctttccacgatccggcttcacaaggat
ggcgtcacggcgctcgccgtcgcgccgggctccggcgcgtcgctggcgtccggctccatc
gatcactccgtcaagttctgttctttcccagagggggtgttccagagcaatatcgcccgg
ttcaccctgccgatccggtcactggccttcaacaagaaggggactctgctggcggcggcc
ggagacgacgacggcatcaagttgattgccaccatcgacaacaccatctccaaagtgctc
aagggccacaagggatcggtaaccgggttgtctttcgatcccagaaacgattatttggca
tcaattgacaccttcggcacagtcatcttctgggatctctgcacggggactgaagcccgt
agtctgaagcggattgcgccgacatttggttcagaccactcaatcaacaatgccctgtgc
tggagccctgatgggcagttccttgctgttccgggattgaggaataatgtggtcatgtat
gataaggacaccggtgaggaggtgttcactctgaaaggggagcatgagcaaccagtgtgt
agtctctgctggtccccaaatgggaggtacctagtcactgctggattggataagcaggtt
ctgatctgggatgtgaagtcaaagcaggatgttgagaggcagaagttcgatgaaaggata
tgtagcttggcttggaaacctgaaggtaatgctgtagcagtgatcgacgtaactggcaga
tttggcatttgggaatcggtcatcccgtcgactttgaaatcgcccacagagggtgcacct
gacctgaactctactaaggttcctttgtttgatgacgaggatgatgaggagaggccgagt
acctctggtggactggatgatgatgatgatgatgaaagtcttggtgaattaggtccattc
aaccacaagagattgaggaggaagtcaacctatcatgatcactcaaatggagatagtgaa
gatgaggatctgatacttcagatggagtcacgcaagagaatgaaagatacacatagagat
aacaaggaggttgctgataaggcaataggtgattcagcaacttcagtaagactggttaca
gcaagaatgcaaactgcatttcagcctgggtccacaccacctcaacctggcaagcgaaat
ttccttgcctacaatatgcttggaagtatcactactatcgaaaatgaggggcattcacat
gtagaggtagacttccatgacaccggaagaggtcctagagttccttcgatgactgattat
tttggtttcacaatggctgcactgaatgaatcaggaagtgtctttgcaaatccatgcaag
ggtgacaagaatatgagcactcttatgtaccgccctttcagtagttgggcaggcaacagt
gagtggtcaatgaggtttgagggagaagaagtgaaggctgtggctgttggtgctggatgg
gtcgctgcagttacaactttaaattttctgcgcattttcacagagggagggttgcagatg
catatcctctcagtcggtggcccagtggttactgcggcaggccatggagatcagctagcg
attgtgtctcatgcttcagattgtctttcatcaggagaccaggtgctggatgttaaagta
ctgaagatatctgaatgtgctcaatcattgtccagccgatttgttttaactcctgcctct
aaattatcttggtttggtttcagtgagaatggtgaacttagttcctttgattccaaggga
atactgagggtcttttctggtcaattcggtggaagctggattccaatatttagttcaatc
aaggcaagaaaatccgaagatgaaagccactgggtggtgggcttagatgctaataatata
ttctgcattctatgcaagtccccggagtcctatccacaggtgatgcccaaacctgttttg
acaatacttgagctgtcatttcctcttgcatcatctgaccttggtgccaatagtttggaa
actgaattcatgatgaggaaactgcatctctcacagattcaaaagaaaatagaagaaatg
gctgctttgggtctggacacgattgcattagatgatgaagcattcaacatggaggctgca
cttgaccggtgcatcttgaggctcatctccagctgctgcaatggtgataagcttgtacga
gctaccgagcttgcaaaattactaacactggagaagtcaatgaagggagcattgatgctt
gttacacgcttaaaacttcccatattgcaagaaaggttcagtgccatactcgaggagatg
atgctaaacaatgcaaaaattgccaatacatctggtgttttctccaatagtaatacaaac
tactcaccatcaccagctttgagcactcaagcagtcccaccagctaaggttgtgcaaaat
ggaaacagcttgaagttacctacattgcctaaactgaatcctgccgcccaacgaagcaat
ccaactgaatcaaacaaggcagagctagaacaagcagacaatttgaaagaaatcagtaca
aaggtttcacctgcacaaactccgttagttaaaattccaaaaaacagtgaaatgggtgta
aaaacgaagaaagataatgatggagcatcacatgcaactacagttgatcagaacccaaag
ggaggcagtggtcaggttggccttaaaaacaagagcgtcgatagctgcaatggtgtacag
cctcagcggccagttaaccccttcgcgaaatcctcatcaagcaaagaacagccatcatcc
ctttttgattccatcaagaagacgaaggtcgaaaatgagaaggttgacaaagctaacagc
aagaaggtgaaagtgtaa
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