Oryza glaberrima (African rice): 127784561
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Entry
127784561 CDS
T08853
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
127784561
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogl01002
]
127784561
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127784561
Enzymes [BR:
ogl01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
127784561
Peptidases and inhibitors [BR:
ogl01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
127784561
Ubiquitin system [BR:
ogl04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
127784561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
DUF3881
Motif
Other DBs
NCBI-GeneID:
127784561
NCBI-ProteinID:
XP_052167850
LinkDB
All DBs
Position
9:complement(18351429..18357076)
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AA seq
1055 aa
AA seq
DB search
MGKRVKAKAKNPRKAQQQQEPTAAAPSDAGSGDAAAAAAQDSGNSTEEAAAAAAAAASAS
GREQCGHYGGDSARLDKVLLEIMTSKHFASCEHCRDDAPRKKGGGKEKGGKQQQKKKGGG
TKGSAAKAKVEKSDMWVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVA
FCLSCEKEVSIEMPRIETVAAVPTEVAGAADRDLGLVNSHGSVIRGLPNLGNTCFFNAVM
QSLLALDRLRSKMLGPDVPTGALLMSLKKLFMETSASNDVGGALSPKNLFSNICSKYPQF
RGFQMQDSHELLRCFLDGLHTEENEARKLADKASSATIPTIVDSIFGGQLSSTVSSTECT
HSSVKHDQFLDLSLPVPSRRPPAKSVSSPPAKRNKQSLRDRNKNRRYGKISTRVTPTIEV
SNKEKIQTVAEGNNSLIPGSESGQVVSEKEPEPSECSESCASVPNLEQTGTSNVEDGTCW
LDYIDDADEAKSEILDSADSIEAGQIWEDKGVTYGPFLPQDDALSKEQVLGSEHSGENPI
DDATSSQPVILLPYKEFGSTADEMDGTTENSQKPEDAVAPPAVSPLPEDNAQPASVGDGD
QDDYVGLGDMFNEPEVTSEVKKETGTVEDIDVMAWSSNSAEDEVDDSNAPVSVEGCLALF
TEPELLSEPWHCELCSDSIACPNTNDGKDDEMATSVNERKDGEEMMAGGDETQDGDKLIA
NCTEKEGIDQIMATDGCSDNLNSDMNSKEGGCANSSLVGADNSVDANFPENGKVALLKTG
SSLVDTTEQADSKTYRREIRDLNNSAVEYTSSSKQPHDSAQHKDEHNVDVASEETTAPEC
SCDNESASCSTTNKNEAECGVGAEEIVTSSLPSETQRILPGEKDNEDVVTRNHGRRKRMK
MVGKAHQGQDNQNEQKENGKKVFRSAMRRILISKAPPVLTINLNRFSQDSHGRFKKLKGH
VRFKETLDVRPFMDPRSKENYNTTYRLVGVVEHLGTMAAGHYVAYVRTGKIGGRQQRSTG
SKSWFYASDAQVREASLEEVLNCEAYILFYERVGD
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggggaagagggtgaaggcgaaggccaagaatccgaggaaagcacagcaacaacaggag
ccgacggcagcggcgccctctgatgctggatctggggatgcggcggcggcggcggcgcag
gactcggggaattcgacggaggaagctgctgctgctgctgctgctgccgcgtcggccagc
ggcagggagcagtgcggacactacggcggcgacagcgcccgcttggacaaggtcctcttg
gagatcatgacgtccaagcatttcgcgtcgtgcgagcattgccgggatgatgcccctagg
aagaaagggggtggcaaggagaaagggggtaagcagcagcagaagaagaaaggaggtgga
acgaaaggttccgcggccaaggcgaaggtggagaagagtgacatgtgggtgtgcttggac
tgcggtcggcatttctgcgggggtgaggttgatgtgaccaagccgtatggccatgcccga
aggcatgccaagcaggaccggcattggtgggctgcacggtttgatgatccgactgttgcg
ttttgtttgtcgtgtgagaaggaggtgtcgatcgagatgcctagaatagagacagttgcc
gcagtgccaacagaggtggctggtgcagctgacagagatctaggtttggttaactctcat
ggtagtgtaatcagagggctgccaaatcttgggaacacatgcttcttcaatgcagtgatg
cagagcctccttgcgcttgataggttgcgcagtaagatgttgggaccagatgttccaacg
ggggctcttttgatgtcattgaagaaactcttcatggagacaagtgcttcaaatgatgta
ggaggtgcgctgagtccaaagaatctcttctcaaatatttgctcaaagtacccgcagttc
aggggcttccagatgcaggacagccatgaattactccgctgttttcttgatggtctgcac
acggaggaaaatgaagcacggaagctagcggataaagcttcaagtgcaaccattcctaca
attgtcgattccatctttgggggtcagctgtctagtacagtgtccagcacagaatgcaca
cacagttctgttaaacatgaccaattccttgatctgtcactaccagttccatccaggagg
cctccagccaagagtgtgtcatcaccaccagcaaagaggaacaaacaatccctaagagat
aggaataaaaatcggagatatgggaagatttcgacccgagtgactcctacaatagaggtg
agcaacaaagaaaagattcaaacagttgctgaaggcaataattccctgattcctggttca
gagtcaggacaggttgtcagtgagaaagagcctgagccttctgaatgcagtgagtcatgt
gcttctgtgcctaatctagaacaaacaggtacttcaaatgtggaggatggcacttgctgg
ttggattacattgatgatgcagatgaagcaaaatcagagattcttgattctgcagattct
attgaagcgggacagatctgggaagacaagggtgttacttatggtccatttcttccgcag
gatgatgccttatcgaaagagcaggtcttgggttctgaacactctggtgaaaaccctatt
gatgatgcaacatcttcacagcctgttatcttgcttccttacaaagaatttggttccact
gccgatgaaatggatggaaccacagaaaattcacagaaaccagaagatgcagttgctcct
ccagctgtttctcccttgccagaagataatgcacaacctgcatctgttggcgatggggat
caagatgactatgttggtcttggtgatatgttcaatgagcctgaagttacttctgaagtc
aagaaagaaacaggtacagttgaagatattgatgtgatggcctggagtagcaacagtgct
gaagacgaggtggatgatagtaatgctcccgtatcagttgagggctgcttggctttgttt
actgaaccggagttgctctctgaaccatggcactgtgagctctgctctgactctattgca
tgcccaaacaccaatgatggcaaagatgatgagatggcaactagtgtcaatgaaagaaag
gatggtgaggagatgatggcaggtggtgatgaaacacaagacggtgataagttgatcgct
aactgcaccgaaaaggagggcattgatcagattatggcaactgacggttgctcagataat
ttaaatagtgatatgaacagtaaagaaggtggttgtgcaaattcttctttggttggtgct
gacaactcagttgatgctaactttccagaaaatgggaaagttgctttactgaaaacaggt
tcgtcacttgttgacacaactgaacaggcagacagcaaaacatatcgtcgagagattagg
gatttgaacaactcagcagtggaatatacatcttcaagtaagcaacctcatgattctgcc
cagcataaggatgaacataatgtggatgtagcctctgaagaaacaactgcaccagagtgt
tcttgtgacaacgaatctgcctcttgcagcacaaccaataagaatgaagctgaatgtggt
gttggtgctgaagaaattgttactagtagccttccatctgagacgcaaagaatcttacca
ggtgaaaaggacaatgaagatgttgtcacgcggaatcatggcagaaggaagcgaatgaag
atggttggcaaggcacatcaagggcaagataaccaaaatgaacagaaagagaatggaaaa
aaggttttcagatctgcaatgagaaggatccttattagcaaggcgccacctgtattgaca
attaatttgaacagattcagtcaggactcgcatggtcggttcaagaaattgaaagggcat
gtgcgctttaaggagacacttgatgtgcggccattcatggacccaaggtctaaggagaat
tacaatacaacttatcgtctcgttggcgttgttgagcacttgggaaccatggcagctggg
cattatgttgcatatgtgagaactggcaagattgggggtcggcagcagaggagcaccggc
tccaagtcatggttttatgcaagtgatgcacaagtcagagaagcctctctggaggaagtt
cttaactgcgaggcttacatactgttttacgaaagggtgggagactaa
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