Oryza glaberrima (African rice): 127784580
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Entry
127784580 CDS
T08853
Name
(RefSeq) LOW QUALITY PROTEIN: meiosis-specific protein PAIR2-like
KO
K12778
meiosis-specific protein
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogl03036
]
127784580
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
127784580
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CCDC84
HORMA
Motif
Other DBs
NCBI-GeneID:
127784580
NCBI-ProteinID:
XP_052167874
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Position
9:18447729..18461661
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AA seq
1029 aa
AA seq
DB search
MVMAQKTKEAEITEQDSLLLTRNLLRIAIYNISYIRGLFPEKYFNDKSVPALEMKIKKLM
PMDAESRRLIDWMEKGKYVLFYVLNLFNFPICSFNPFLXXILGVYDALQKKYLKTLLFCI
CEKEEGPMIEEYAFSFSYPNTSGDEVAMNLSRTGSKKNSATFKSNAAEVTPDQMRSSACK
MIRTLVSLMRTLDQMPEERTILMKLLYYDDVTPEDYEPPFFKCCADNEAINIWNKNPLKM
EVGNVNSKHLVLALKVKSVLDPCDDNNVNSEDDNMSLDNESDQDNDFSDTEVRPSEAERY
IVAPNDGTCKGQNGTISEDDTQDPAHEEELTAQVREWICSRDTESLEVSDVLVNFPDISM
EMVEDIMERLLKDGLLSRAKKDSYSVNKIADPTTPHIKKEVIMQNVSPTEGTKNSNGDLM
YMKALYHALPMDYVSVGKLHGKLDGEASQNMVRKLIEKMVQDGYVKNSANRRLGKAVIHS
EVTNRKLLEIKKILEVDIAEQMAIDTNAEPGEPERKDHLSGHEMRDGSTMGCLQSVGSDL
TRTRELPEPQQNVSMQSGQEASTVDKDPSRTPTSVREQASVCSLESGVLGQKVRKSLAGA
GGTQCSQDKRFRKASTVKEPILQYGRRHRYFPAHRAALAAALSRFRSKLLDLRRALRHPS
SAARSRLWCPFCSADLVDLDSRFACSNAIYHLASQDHLNGVKAFLQKHGGGMDQVGSFRI
SEDELAKWEKCCESSSTEQETSTEGLIGPSLGPLKDIRNKSTSKHLDNFAETYIPSSSNT
ASNVVMPLQSPTNGAYYPNSTACQGSSSFGSILYSAPFETFGVPIIPCGSVALHEQQVML
GTDLFQSAGTKMKGGQLTILGNGPNSSVSCSVHVQQRNSGGNSSQGLKANVHTGAPPPWL
EASERDQENESLSGYARPSSRKGKSGKLNPKRVGAAWAERRRAEMEMEKRGELVPETSDS
SWLPNFGGVWQSGTRKESRKEFEKNHKPHEEKSNKLSLEMKPYISKRMRVGSNKDEQSVN
RSTWLPDDL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggctcagaagacgaaggaggcggagatcacggagcaggattcgctgcttctg
acaaggaatttgctccgcattgctatatacaacatcagctacatcagaggtctattccct
gagaagtacttcaatgataagtcggttccggcactagagatgaagattaagaagctaatg
cccatggatgctgagtcgaggaggttgattgattggatggaaaaaggtaaatatgtcctg
ttttacgtgttaaatctttttaattttccaatttgttcatttaatccatttttgtgataa
attttaggtgtctatgatgcactacagaagaaatatctcaagacccttctcttctgcatc
tgtgagaaggaggaaggcccaatgattgaggagtatgcattctcatttagctaccccaac
acgagcggtgatgaagttgcaatgaacttgagccgcacagggagcaagaaaaacagtgct
acatttaaatcaaatgcagcagaagtcactcctgatcagatgaggagctctgcttgtaag
atgataagaacactggtttcacttatgaggaccttggaccaaatgccagaggagaggacc
attctaatgaagctgctatactacgatgatgtcacacctgaagattacgagccacccttt
tttaagtgttgcgctgacaacgaggccataaatatatggaacaagaaccccttgaagatg
gaagttggaaatgtcaatagcaagcatctcgtgttagctttgaaggtcaagagtgtcctt
gacccttgtgatgataacaatgtcaacagtgaagatgataatatgagcttggataatgaa
tctgaccaagataatgatttttctgacactgaggttcgcccatctgaagcagagcgttac
attgttgctccaaatgatgggacttgcaaaggtcaaaatggtacaatctcagaagatgat
actcaagatcctgctcatgaggaagagctaacagctcaagtaagagagtggatatgctca
agagacactgaaagtcttgaggtttcagatgtccttgttaatttccccgacatatcaatg
gaaatggttgaagatattatggagaggctacttaaagatggtttactatccagagcaaaa
aaggatagttattctgttaataagattgctgatcctacaacaccacacataaagaaagag
gtcatcatgcaaaatgtctcacctactgaaggaactaaaaatagcaatggtgatctgatg
tatatgaaggcactgtaccatgcacttccaatggattatgtgtcagtaggcaaacttcat
ggcaagctagatggggaggccagccagaacatggttcgtaagttaattgaaaaaatggtg
caagacggatatgtcaagaattcagccaaccgaagactaggcaaagctgtcattcattct
gaagtcaccaacagaaagctccttgagataaaaaagattctggaagtcgatatagccgaa
caaatggccattgataccaatgcagaacctggtgagcctgagcgcaaagaccacctgagt
ggccatgaaatgagagatggatcgacgatgggttgcctccagtccgtcggatctgacctc
acccgcacccgggagcttccggagccgcagcagaacgtgtccatgcagagcgggcaggaa
gcttccacggtggataaggatccaagcaggactcctacaagcgtgcgcgagcaggcgtcc
gtttgttccctggagagtggggttctcgggcagaaggtcagaaagtctttggctggtgct
ggcgggacgcagtgctcgcaggacaagcgattcaggaaggccagcacggtgaaggagccg
atcctccagtacggccgccgccaccgctacttccccgcccaccgcgccgccctcgccgcc
gcgctctcccgcttccgctccaagctcctcgacctgcgccgcgcgctccgccacccgtcc
tccgcggcccgctcccgcctctggtgccccttctgctccgccgacctcgtcgacctcgac
agccgcttcgcttgtagcaatgctatttatcatctcgcaagccaggatcacctaaatggc
gtgaaggctttcctgcaaaagcatggtggtgggatggatcaggtgggttcgtttaggatt
tcggaggatgagcttgctaagtgggagaagtgctgcgagtcttcgagtacagaacaagag
acgtcgaccgaagggttgattggaccatctctggggccactgaaagatatccgaaataaa
tctacctctaaacatttggataattttgcagaaacttacatcccgtcttctagtaatact
gcatctaatgttgttatgcctttacaaagtcctactaatggggcatactaccccaatagt
acagcatgccagggatcttcctcctttggaagtattctgtattctgctccatttgagact
ttcggagtgcccatcataccttgtggatcggttgcattacatgaacaacaggttatgctg
ggtacagacttgtttcaaagtgcaggcacaaaaatgaaaggtggtcaacttactatcctc
ggaaatggaccaaattcatcggtttcttgttctgttcatgtccaacagagaaactctggt
ggaaattccagtcagggcttgaaagcaaatgtgcacacgggtgctcctcctccctggtta
gaagctagcgagcgtgatcaggagaatgagtcacttagtggttatgctcgtccatcctct
cggaaaggaaaatctggaaagcttaacccaaagcgtgtaggagctgcatgggcagagagg
agaagagcagaaatggagatggaaaaacgaggtgaacttgttccagaaacatctgattct
agttggctccctaactttggtggtgtctggcaatctggtacaagaaaggaatcaaggaaa
gagtttgagaaaaaccataagcctcacgaagagaagagcaacaagttgtcccttgagatg
aaaccatatataagcaaacggatgcgcgtaggttccaataaagatgaacagtcagtgaac
agatctacatggttgccagatgatttgtga
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