Oryza glaberrima (African rice): 127784607
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Entry
127784607 CDS
T08853
Name
(RefSeq) 26S rRNA (cytosine-C(5))-methyltransferase NOP2B-like isoform X1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ogl03009
]
127784607
Enzymes [BR:
ogl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
127784607
Ribosome biogenesis [BR:
ogl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127784607
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
Motif
Other DBs
NCBI-GeneID:
127784607
NCBI-ProteinID:
XP_052167903
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All DBs
Position
9:20582164..20587505
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AA seq
708 aa
AA seq
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MAKKGAPRRQQPAPAARQLAVAKKGKAPPKAAKRAPKKKQELLESSSDDSELEQQQERLQ
ELEEDESGSDLDAPSDSGAEELSDSDDASLEGGDSGDEEEDDDEEEEEDDDDPLADDFLA
GSSDDESGFVADGDDSGVDSDESDDLEAKSRAIDEAKGKAEEEAEEELKLNIRSESDEFR
LPTKEELEEEALRPPNLPHLKRRISEIVRVLSNFSKLRQKDVPRKDYVDQLKTDVMSYYG
YNDFLVEAFIEMFPAVELLELLESFEKRPPECLRTNTLKTRRRDLAAALIPRGFNLDPIG
KWSKVGLVVYDSTISAGATVEYMAGHYMKQGASSFLPVMALAPQEKERIVDMAAAPGGKT
TYIGALMKNTGIIYANEFSEKRLHGLLGNIHRMGVTNTIVCNYDGKELPKVLGMNSVDRV
LLDAPCTGTGTIWKDPQIKMSKGIEDIRDCAFVQKQLLLAAIDLVDANSKTGGYIVYSTC
SLMIPENEAVIDYALKKRSVKLVPCGLDFGRPGFIRFREHRFHTSLDKTRRFYPHVNNMD
GFFVAKLKKLSNTIPVTSESPKVPGEAIEKTDPSTDDLQEQPVQSKKHKDVKKMNEETTI
LDGVTEDKQQTHDRTEKTLKNHKKGEKKRNGPDSGKTKGDEKETHNEQEEPTSEKKQPVS
AKIKKTVPKRTSATKEKKPDTDQGGKRKRNWMVRREWEAYKKSRSKKV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagggcgcgccacgcaggcagcagccggcgccggcggcgcggcaactggcc
gtggcgaagaaggggaaggcccccccgaaggcggcgaagagggcgccgaagaagaagcag
gagctgctcgagtcgtcctccgacgactccgagctggagcagcagcaggagcggctccag
gagttggaggaggatgagtcagggtcggacctcgacgccccctcggactccggcgccgag
gagctctccgactccgacgacgcctccttggagggaggagacagcggcgacgaggaggag
gacgatgacgaggaagaggaggaagacgacgacgaccccctcgctgacgacttcctcgct
ggaagtagtgacgacgaaagtggttttgtagctgatggagacgactccggagtggattca
gatgagtctgacgaccttgaggccaagtcgcgagcaattgatgaagcgaaagggaaggca
gaagaagaggctgaggaggaactcaaactcaatattagatcagaatctgatgagttccga
ttgcctacaaaggaggagttggaggaagaggcacttagaccaccaaacctgccacatctt
aaaaggaggatatcagaaattgtccgggtactctcaaactttagtaagctaaggcaaaaa
gatgtgccgcgaaaggattatgtcgatcaactcaagactgatgtaatgtcatactatgga
tacaatgattttcttgttgaagcatttattgagatgttcccagctgttgagcttcttgag
ctactggaatcttttgagaaaagaccacctgagtgcttgcggacgaatacattgaagacc
cggagaagggatcttgctgctgctcttataccaagaggatttaatctggatccgataggg
aagtggtcaaaggttggtctggttgtatatgactccaccatttcagctggtgccactgtt
gaatatatggctgggcattatatgaaacaaggtgcaagttctttcttgcctgtgatggct
cttgctcctcaggagaaggagcgaattgttgatatggcggctgccccaggtggcaagact
acatatattggagctcttatgaagaatactggaataatttatgcaaatgagttcagtgag
aaaaggttgcatggacttttgggcaacatacatcgcatgggtgttaccaataccatagtt
tgtaattacgatggtaaagagctacccaaagttcttgggatgaattcggttgacagagtt
cttttggatgcaccctgcacaggcacagggaccatttggaaggacccacaaattaaaatg
tcgaagggcattgaggacatcagagactgcgcttttgtacaaaagcaactcctgttagca
gctattgatttggttgatgccaactccaaaactggcggttacattgtttactcaacctgt
tcgttgatgattcccgagaatgaggcagttatcgattatgcccttaaaaagcgaagcgta
aagcttgtgccttgtggattagattttgggcgtccaggattcatccggttccgagagcat
cgattccatacttctttagataaaacaaggaggttttatcctcatgtgaataacatggat
ggattttttgttgcaaagctgaaaaagttgagcaatacaatcccagtgacatccgagtca
cctaaagtgcctggagaagcaattgagaagactgatcctagcaccgacgatcttcaagaa
cagcccgttcagtcaaaaaaacacaaagatgtgaagaagatgaatgaagagacaaccatc
cttgatggggtgactgaggacaaacaacagacacatgataggactgaaaagacgctcaag
aaccataagaagggtgagaagaaacggaatggccctgacagtggtaaaacaaagggagat
gaaaaagaaacacacaacgaacaagaagagcctacgagtgaaaaaaagcagcctgtgtct
gctaaaattaaaaaaactgttcccaagagaacatcagcaaccaaagaaaagaagccggat
actgaccaaggagggaagaggaaaaggaactggatggttaggcgagaatgggaagcttat
aagaagtcgaggagtaaaaaggtatga
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