KEGG   Oryza glaberrima (African rice): 127784819
Entry
127784819         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 20
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127784819
   04120 Ubiquitin mediated proteolysis
    127784819
  09126 Chromosome
   03083 Polycomb repressive complex
    127784819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127784819
   04121 Ubiquitin system [BR:ogl04121]
    127784819
   03036 Chromosome and associated proteins [BR:ogl03036]
    127784819
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127784819
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127784819
   Cul7 complex
     127784819
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127784819
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127784819
SSDB
Motif
Pfam: Skp1 Skp1_POZ Ribosomal_60s
Other DBs
NCBI-GeneID: 127784819
NCBI-ProteinID: XP_052168169
UniProt: I1QQU3
LinkDB
Position
9:complement(20027386..20030057)
AA seq 175 aa
MAAEAETKAMITLRSCEGQVFEVAEAVAMESQTIRHMIEDKCADTGIPLPNVSAKILSKV
IEYCSKHVEARGGAAAAADGDAPAPAAVEANKAVEDELKTFDSEFVKVDQSTLFDLILAA
NYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE
NT seq 528 nt   +upstreamnt  +downstreamnt
atggcggccgaggcggagacgaaggcgatgatcaccctacgcagctgcgagggccaggtg
ttcgaggtcgcggaggccgtggccatggagtcccagactatccgccacatgatcgaggac
aagtgcgccgacaccggcatcccgctccccaacgtctccgccaagatcctctccaaggta
atcgagtactgcagcaagcacgtcgaggcgcgcggcggggcggccgccgccgccgacggc
gacgcccccgcccccgccgccgtggaggccaacaaggccgtcgaggacgagctcaagacg
ttcgactccgagttcgtcaaggtcgaccaatccaccctcttcgatctcatcctggctgca
aactacctcaacatcaagggactgctggatctgacctgccagaccgtggctgacatgatc
aaggggaagacaccagaggagatccgcaagaccttcaacatcaagaatgacttcaccccg
gaggaagaagaggaggtgaggagggagaaccagtgggccttcgaatga

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