Oryza glaberrima (African rice): 127784937
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Entry
127784937 CDS
T08853
Name
(RefSeq) heat stress transcription factor B-2c isoform X1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127784937
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
127784937
SSDB
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Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
Motif
Other DBs
NCBI-GeneID:
127784937
NCBI-ProteinID:
XP_052168322
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Position
9:complement(19394127..19398172)
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AA seq
454 aa
AA seq
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MAEQGAGEADAGGGEPPPAAVMTAAAEALAGQRSLPTPFLTKTYQLVEDPAVDDVISWNE
DGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKR
LLCDIHRRKVVAAAAAAPPPPSPGMATAAAAVASGAVTVAAAPIPMALPVTRAGSPAHSS
EEQVLSSNSGSGEEHRQASGSGSAPGGGGGGSASGGDMGEENERLRRENARLTRELGHMK
KLCNNILLLMSKYAATQHVEGSAGISSIANCSGESSEAVPPPPPLPPAILDLMPSCPALA
TAAAAAGLAIDGEPDPSARLFGVSIGLKRTRDDAAAAADEDGGGEDQAEHGGADVKPEAA
DPHPAGGGGGSSTEASPESHPWPIYRPTPMYHAVRPTCNGPDRAGSDQDGSSSSQTMGHG
EFDDLQKMMVVQQSNFVMHWGRSECGSGVRGFGW
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagggggcgggcgaggcggatgcgggcggcggggagccgccgccggcggcg
gtgatgacggcggcggcggaggcgttggcggggcagaggtcgctgccgacgccgttcctg
acgaagacgtaccagctggtggaggacccggcggtggacgacgtgatctcgtggaacgag
gacgggtcgacgttcgtggtgtggcggccggcggagttcgcgcgggacctcctccccaag
tacttcaagcacaacaacttctccagcttcgtgcgccagctcaacacctatggatttagg
aagatcgtgccggaccggtgggagttcgccaacgactgcttccggcgaggggagaagcgt
ttgttgtgtgatatacaccgccggaaggtggtggcggcggcggccgcggcgccgccgccg
ccgtcgccggggatggcgacggcagctgccgcggtggcttcgggagctgtgacggtggcc
gcggcgccgatacctatggcgctgccggtgacgcgggcgggctcgccggcgcactcctcg
gaggagcaggtgctgtcgtcaaactctgggtcgggggaggagcaccggcaagcgtccggg
tccggctctgcgcccggcggcggcggcggcggctccgcgtccggcggcgacatgggcgag
gagaacgagcggctccggcgggagaacgcgcggctgacgcgggagctcggccacatgaag
aagctctgtaacaacatcctcctcctcatgtccaagtacgccgccacccagcacgtggag
ggctccgcggggatatcctccatagcgaactgctccggcgagtcgtcggaggccgttccc
ccgccgccgcctctccccccggcgatactcgatctaatgccgtcgtgccccgccctggcc
accgccgccgccgctgcggggctcgccatagacggcgagcccgacccgagcgcgcggctg
ttcggcgtctccatcggcctgaagcggacgcgagacgacgccgccgccgccgccgacgaa
gacggcggcggcgaggatcaggccgagcacggcggcgcggacgtgaagccggaggcggcg
gatccgcatcccgccggcggcggcggcggaagcagcacggaggcgtcgccggagtcgcac
ccgtggcccatataccggccaacccccatgtaccacgcggtcaggcccacttgcaacggg
ccggacagggccgggtccgaccaagacgggtccagctccagccaaacgatgggacatggt
gaattcgacgatctgcaaaagatgatggtggtgcaacagagcaacttcgtgatgcactgg
ggacgctcggaatgcggtagtggcgtaaggggttttggatggtga
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