Oryza glaberrima (African rice): 127784948
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Entry
127784948 CDS
T08853
Name
(RefSeq) ubiquitin-60S ribosomal protein L40-1
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03010
Ribosome
ogl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
127784948
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127784948
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ogl03011
]
127784948
04121 Ubiquitin system [BR:
ogl04121
]
127784948
Ribosome [BR:
ogl03011
]
Ribosomal proteins
Eukaryotes
Large subunit
127784948
Archaea
127784948
Ubiquitin system [BR:
ogl04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
127784948
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Dsc3_N
Plexin_RBD
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
127784948
NCBI-ProteinID:
XP_052168335
UniProt:
I1QRF2
LinkDB
All DBs
Position
9:21538254..21540344
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AA seq
129 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIKN
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctgacggggaagaccatcacgctcgaggtcgagagcagc
gacaccatcgacaatgtcaaggccaagatccaggacaaggaaggcatccctccggaccag
cagcgcctcatcttcgccggcaagcagctggaggatggccgcaccctggccgactacaac
atccagaaggagtccacgctccacctcgtcctccgcctccgcggtggcatcatcgagccc
tccctccaggccctcgcccgcaagtacaatcaggacaagatgatctgccgcaagtgctat
gctcggctgcaccccagggctgtcaactgccgcaagaagaagtgcggccacagcaaccag
ctgaggcccaagaagaagatcaagaactag
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