Oryza glaberrima (African rice): 127784997
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Entry
127784997 CDS
T08853
Name
(RefSeq) SKP1-like protein 5
KO
K03094
S-phase kinase-associated protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
ogl04120
Ubiquitin mediated proteolysis
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127784997
04120 Ubiquitin mediated proteolysis
127784997
09126 Chromosome
03083 Polycomb repressive complex
127784997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127784997
04121 Ubiquitin system [BR:
ogl04121
]
127784997
03036 Chromosome and associated proteins [BR:
ogl03036
]
127784997
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
127784997
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
127784997
Cul7 complex
127784997
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
127784997
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
127784997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
BTB
Motif
Other DBs
NCBI-GeneID:
127784997
NCBI-ProteinID:
XP_052168387
LinkDB
All DBs
Position
9:complement(13701756..13702317)
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AA seq
179 aa
AA seq
DB search
MFDEKTKPKSPMAEAAAKEVAGAAAAAGDMILLISSDGQRFEVAQAVASMSRLVRNMVED
ECTDNGVPLPNVPSAVLAKVLEYCSEHAAAAAAAGEEVEELKSFDAAFIEVDNATLFDLI
LAANYLNVPCLLALACQRAADLIRGKTVEEIRAEFNIANDFTPEEEAEIRKENAWAFQD
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgagaaaactaaaccaaaatctccaatggcggaagcagcagcaaaggaggtc
gccggcgccgccgccgccgccggcgacatgatcctgctgatcagctccgacggccagaga
ttcgaggtggcgcaggcggtggcgagcatgtcgaggctggtgcgcaacatggtcgaggac
gagtgcaccgacaacggcgtccccctccccaacgtcccctccgccgtcctcgccaaggtg
ctcgagtactgcagcgagcacgccgccgccgccgccgccgccggcgaggaggtggaggag
ctgaagagcttcgacgcggcgttcatcgaggtggacaacgcgacgctgttcgacctgatc
ctggccgcgaactacctcaacgtgccgtgcctgctggccctcgcgtgccagcgcgcggcc
gacctgatcagggggaagacggtggaggagatcagggccgagttcaacatcgccaacgac
ttcacgcccgaggaggaggcggagatccgcaaggagaacgcgtgggccttccaggactag
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