KEGG   Oryza glaberrima (African rice): 127784997
Entry
127784997         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127784997
   04120 Ubiquitin mediated proteolysis
    127784997
  09126 Chromosome
   03083 Polycomb repressive complex
    127784997
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127784997
   04121 Ubiquitin system [BR:ogl04121]
    127784997
   03036 Chromosome and associated proteins [BR:ogl03036]
    127784997
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127784997
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127784997
   Cul7 complex
     127784997
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127784997
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127784997
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB
Other DBs
NCBI-GeneID: 127784997
NCBI-ProteinID: XP_052168387
LinkDB
Position
9:complement(13701756..13702317)
AA seq 179 aa
MFDEKTKPKSPMAEAAAKEVAGAAAAAGDMILLISSDGQRFEVAQAVASMSRLVRNMVED
ECTDNGVPLPNVPSAVLAKVLEYCSEHAAAAAAAGEEVEELKSFDAAFIEVDNATLFDLI
LAANYLNVPCLLALACQRAADLIRGKTVEEIRAEFNIANDFTPEEEAEIRKENAWAFQD
NT seq 540 nt   +upstreamnt  +downstreamnt
atgttcgacgagaaaactaaaccaaaatctccaatggcggaagcagcagcaaaggaggtc
gccggcgccgccgccgccgccggcgacatgatcctgctgatcagctccgacggccagaga
ttcgaggtggcgcaggcggtggcgagcatgtcgaggctggtgcgcaacatggtcgaggac
gagtgcaccgacaacggcgtccccctccccaacgtcccctccgccgtcctcgccaaggtg
ctcgagtactgcagcgagcacgccgccgccgccgccgccgccggcgaggaggtggaggag
ctgaagagcttcgacgcggcgttcatcgaggtggacaacgcgacgctgttcgacctgatc
ctggccgcgaactacctcaacgtgccgtgcctgctggccctcgcgtgccagcgcgcggcc
gacctgatcagggggaagacggtggaggagatcagggccgagttcaacatcgccaacgac
ttcacgcccgaggaggaggcggagatccgcaaggagaacgcgtgggccttccaggactag

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