Oryza glaberrima (African rice): 127785125
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Entry
127785125 CDS
T08853
Name
(RefSeq) ornithine decarboxylase 1B, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00330
Arginine and proline metabolism
ogl00480
Glutathione metabolism
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl04148
Efferocytosis
Module
ogl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
127785125
09106 Metabolism of other amino acids
00480 Glutathione metabolism
127785125
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127785125
Enzymes [BR:
ogl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
127785125
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Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
127785125
NCBI-ProteinID:
XP_052168507
LinkDB
All DBs
Position
9:complement(20192156..20194131)
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AA seq
414 aa
AA seq
DB search
MVGGSPMQAVLMAPGVKDKKVLAFKRGKGKDAEAGVTALIRDIVAGGARSAFHVFDLAKV
VDLHRGWRRALPDVRPCYAVKCNPDGAMLAALAALGAGFDCASRAEIEAVLALGVRPATI
VYANPCKPEAHLEYAAEVGVNLTTYDSEEEVAKVRRCHPRCELLLRIKAPDSGDAKVDLG
LKYGANPDEVLPLLRAAQREGVAVAGVSFHVGSGASRADVYRGAIEAARAAFDAAAALGM
PPMRVLDIGGGFMAGRTFDEAAAVINRALERHFGDLPCVEVIGEPGRYFAETAFTLAARV
IGKRTRGELREYWIDDGLYGSLNCILMDHYVPRPRPLAAAAAGEDTTAATTHASTVFGPT
CDSLDTVVTGYQLPEMSVGDWLVFDDMGAYTTAAGSNFNGFATSAIKIHLAYSS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggttggaggaagccccatgcaggccgtgctcatggcccccggcgtcaaggacaagaag
gtgctcgccttcaagcgcggcaagggcaaggacgccgaggccggcgtcacggcgctcatc
cgcgacatcgtcgccggcggcgcccggagcgcgttccacgtcttcgacctcgccaaggtc
gtcgacctccaccgcgggtggcgccgcgcgctcccagacgtgcgcccctgctacgccgtc
aagtgcaaccccgacggcgccatgctcgccgcgctcgccgcgctcggcgccggcttcgac
tgcgccagccgcgccgagatcgaggcagtgctcgcgctcggcgtccgccccgccaccatc
gtctacgccaacccgtgcaagcccgaggcgcacctcgagtacgccgccgaggtcggcgtc
aacctcaccacctacgactccgaggaggaggtggccaaggtccggcgatgccacccgcgc
tgcgagctgctgctccgcatcaaggcgcccgactccggcgacgccaaggtcgacctgggg
ctcaagtacggcgccaacccggacgaggtgctaccgctcctccgcgccgcgcagcgcgag
ggcgtcgccgtcgccggcgtctccttccacgtcgggagcggcgcgtcccgcgccgacgtc
taccgcggcgccatcgaggcggcgcgcgcggcgttcgacgccgcggcggcgctcggcatg
ccgccgatgcgcgtcctcgacatcggcggcggcttcatggccggccggaccttcgacgag
gcggcggcggtcatcaaccgcgcgctggagcgccacttcggcgacctcccctgcgtcgag
gtgatcggcgagcccgggcggtacttcgccgagacggcgttcaccctcgccgcgcgcgtc
atcgggaagcgcacccgcggcgagctccgggagtactggatcgacgacggcctctacggc
tccctcaactgcatcctcatggaccactacgtgccgcgcccgaggccgctcgccgccgcc
gccgccggcgaggacacgacggcggcgacgacgcacgcctcgacggtgttcggcccgacg
tgcgactccctcgacacagtggtcaccggctaccagctgccggagatgagcgtcggcgac
tggctcgtgttcgacgacatgggcgcctacaccaccgcggctggctccaacttcaacggc
ttcgccacgtcagcgataaagatccacctggcatactccagctag
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