KEGG   Oryza glaberrima (African rice): 127785126
Entry
127785126         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127785126
   04120 Ubiquitin mediated proteolysis
    127785126
  09126 Chromosome
   03083 Polycomb repressive complex
    127785126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127785126
   04121 Ubiquitin system [BR:ogl04121]
    127785126
   03036 Chromosome and associated proteins [BR:ogl03036]
    127785126
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127785126
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127785126
   Cul7 complex
     127785126
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127785126
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127785126
SSDB
Motif
Pfam: Skp1_POZ Skp1 Flu_PB2_4th
Other DBs
NCBI-GeneID: 127785126
NCBI-ProteinID: XP_052168508
UniProt: I1QRQ9
LinkDB
Position
9:complement(4826296..4826907)
AA seq 166 aa
MASAAAADVAADGKKMILLVSSDGVKFELSEAAASLSKTLGNMIEDDCATNGAIPLANVA
SDILAKVVEYCNKHAAAAAAKASGEEELRRFDAEFVNIDRKKLFGLINAANFLDMPCLLE
LTCQRAADFIKDMMPEQVRKVFGIENDFTPEEEAEVRNENAWAYEI
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcatcggcagcagcagcagacgttgccgccgacggcaagaagatgatcctgctggtc
agctcggacggtgtgaaattcgagctgtcggaggcggcggcgagcctgtccaagacgttg
ggtaacatgatcgaggatgactgcgccaccaacggtgccatccctctcgccaacgtcgcc
tccgacatcctcgccaaggtggtcgagtactgcaacaagcacgccgccgccgccgccgcg
aaagctagcggggaggaggagcttaggaggttcgacgctgagttcgtcaacatcgacagg
aagaagttgttcggcctgatcaatgccgccaacttcctggacatgccgtgcctgctggag
ctgacatgccagcgcgcggcggacttcatcaaagacatgatgccggagcaggtcaggaag
gtatttgggatcgagaacgacttcacgccggaggaggaggccgaggtccgtaacgagaac
gcctgggcctatgagatatag

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