Oryza glaberrima (African rice): 127785304
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Entry
127785304 CDS
T08853
Name
(RefSeq) cysteine--tRNA ligase CPS1 homolog, chloroplastic/mitochondrial
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127785304
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogl01007
]
127785304
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ogl03016
]
127785304
Enzymes [BR:
ogl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
127785304
Amino acid related enzymes [BR:
ogl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
127785304
Transfer RNA biogenesis [BR:
ogl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127785304
Prokaryotic type
127785304
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
tRNA-synt_1f
DALR_2
tRNA-synt_1
MAP65_ASE1
DUF6825
PP_kinase_N
Motif
Other DBs
NCBI-GeneID:
127785304
NCBI-ProteinID:
XP_052168702
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Position
9:complement(20862345..20867997)
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AA seq
575 aa
AA seq
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MAAAAAAARRAVGLLPLLLSSPSRARLPHCQALALTPPLLRPHRLYSHSPKPSSSAAFSA
SASASASNGAPAGRARELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARA
YVAFDVLYRYLRYLDHKVRYVRNFTDIDDKIIARANQLGEDPFSLSKRYSDDFLSDMANL
HCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNR
AGERVAVDERKKNPADFALWKAAKDGEPCWDSPWGPGRPGWHIECSAMSAHYLGHSFDIH
GGGEDLIFPHHENEIAQSRAACCDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTELY
HPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPAN
TTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAMEE
KIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEI
RKELAAVGIALMDGPDGTTWRPSAPLSEQGVVAST
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcggcgaggcgcgccgttggcctcctccctctcctcctctcc
tcgccgtcgcgagctcgcctaccgcactgccaagcgcttgccctgacccctcctctgctt
cgcccccaccgcctctactcccactcccccaagccctcgtcgtccgccgcgttttccgcc
tccgcctccgcctcggcctcgaatggcgcgcctgcggggagagcccgggagctgcacctc
tacaacaccaagtcgcggaggaaggagctcttccagccccgggtgcccggcggggaggtc
ggcatgtacgtctgcggcgtcaccccctatgacgacagccacatcggccacgcccgcgcc
tacgtcgccttcgacgtcctctacaggtacttgcgttatttggaccataaagtgcgctat
gttcggaattttactgacattgatgacaagataattgcaagagcaaatcaattgggagaa
gatccttttagcttaagcaaaaggtactctgatgacttcctatcagacatggctaatctt
cattgtttaccaccatctgtggagcctcgtgtttcagaccacatcgatcagattataaac
atgattaaacagatcattgataatgattgtgcatatgcaattggtggggatgtttatttc
tctgttgaaaatttccctgaatatggggatttatctggtcgaaaattagatgataataga
gctggtgaaagggttgctgttgatgagaggaagaagaacccagctgattttgctctgtgg
aaggctgcaaaagatggggagccatgttgggatagcccttggggccctggaaggccagga
tggcacatagaatgcagtgctatgagtgcacattacttgggccactctttcgacatacat
ggcggtggggaggacctgatctttccacaccatgaaaatgaaattgctcagagccgtgca
gcatgttgtgacagcagcataaattactggatacacaatggctttgtcaatgtaaacagc
cagaaaatgtcaaaatcgctgggcaactttgtcactatacgcaaagttacggaactgtac
cacccacttgctttgaggatgtttttacttggtacacactacaggtccccgatcaactat
accatagaacagcttaatgttgcatcagacagactgtactacacttaccagacactacaa
gattgtgaagaaagttgtcaacagcaccaaagcaaggctggagatccattacctgctaat
actacaaattgtatccagaagcttcatgatgaatttgagacttcaatgtctgatgatctt
cacacttcagtagcactggctgctatttctgagccactaaaagttatgaatgacttactg
cacactcgtaagggaaagaagcaggaaaaacggttggaatcactttctgctatggaagag
aaaataaggatggtgctttctgtcctagggctactgccatcaagctattatgaggctcta
cagcagctgcgggaaaaagcacttagaagagcttccatgacagaggaacaggtgcttcag
aaaattgaagaaaggacttcagcaagaaaggcaaaacagtatgaaaaatccgatgaaatc
agaaaagaattggctgctgttggaattgccctcatggacggtcctgacggaacaacttgg
aggccatctgcacctctttctgagcaaggggtggttgccagtacatga
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