Oryza glaberrima (African rice): 127785334
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Entry
127785334 CDS
T08853
Name
(RefSeq) zinc finger CCCH domain-containing protein 59
KO
K24939
CWF19-like protein 1
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ogl03041
]
127785334
Spliceosome [BR:
ogl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127785334
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf_CCCH_4
zf-CCCH
Torus
zf-CCCH_4
zf-CCCH_2
HIT
zf-CCCH_3
Motif
Other DBs
NCBI-GeneID:
127785334
NCBI-ProteinID:
XP_052168726
UniProt:
I1QNC0
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All DBs
Position
9:10845944..10851900
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AA seq
613 aa
AA seq
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MAAAAASPSPATPPRILLAGDANGRLHQLFKRVTSVNQSTGPFHALLCVGQFFSPDAGDG
DGGGGGEVADYLEGRAAVPIPTYFTGDYGPAAPRLLAKAASSARGFSPGGIQICPNLFWL
RGSARFTLHGLSVVYLSGRKGPGGPGCYSQDDVDALRALAEEPGIVDLFLTNEWPAGVVN
GVDTSNAPSQISDPHGYDPVVAALVAEIKPRYHIAGSKGVFYAREPYVNDSAAHVTRFIG
LANVGNKEKQKFIHAISPTPASTMSSVDIHARPPNTTLSPYISPAKSVPVEETPKRPAED
ADLQYWRYDVKKQRHGEAGGNRLCFKFTSSGSCPRGSKCNYRHDEEAREHYNRNVCFDFL
NKGKCEKGPECRFAHSLSDEGAVRDTKPRSERRRVESSCWFCLSSPDVESHLVISIGEGY
YCALAKGPLVPNHVLVIPVEHCSSTLKMPVEAEAELGRYKDALAKYFEKQGKIAIYFEWV
SQQSRHANLQAVPVPLSKASSVKKIFHLAAQRLGFEFSVVNPDGGANRARELLRSECDSK
SSLFYVELPEGSVLLHLVDSNEKFPAQFGREVLAGLLSMADRADWRNCKVSKEEEIQMVD
DFKQGFREFDPAE
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgctgcctcgccgtctccggcgacgccgccgcggatcctcctcgccggc
gacgcgaacggccgcctccaccagctcttcaagcgcgtcacctcggtgaaccagtcgacg
gggccgttccacgcgctgctctgcgtcgggcagttcttctcccccgatgccggcgacggg
gatggcggcggcggcggggaggtcgcggactacctggagggacgcgccgccgtgcccatc
ccgacctacttcaccggggactacggccccgcggcgcctcgccttctcgcgaaggccgcg
tccagcgcccgaggcttctcccccggaggcatccagatatgccccaacctcttctggctc
agaggcagcgcccgcttcaccctccatggtttatctgtcgtttacttgtcgggaaggaaa
gggccaggagggcctggctgctacagccaggatgatgttgatgcactacgggctcttgcc
gaagagccggggattgttgatttgtttttgactaacgaatggcctgctggagtggtgaat
ggagttgatacttctaatgcaccttctcagatatcggatcctcatggatatgatcctgta
gttgctgcattggttgctgagattaagccacgatatcatattgcaggttctaaaggtgta
ttctatgcaagggaaccatatgtgaatgattccgctgcacatgttacccgttttattgga
cttgctaatgttggaaacaaagagaagcagaaatttattcatgcaatttctcctactcca
gcatctaccatgtccagtgttgatattcacgcaaggcctccaaatactactttatcccca
tatatttctccagcaaagtcagttcctgttgaagaaactccaaagcgtcctgctgaggat
gctgatttgcaatactggcgttacgatgtcaagaagcaaagacatggtgaagccggtggg
aatcgtctatgtttcaaatttacatcatcaggatcctgtcctcgagggagtaaatgcaat
tataggcatgatgaggaggccagggagcattacaataggaatgtctgttttgatttctta
aacaaaggaaaatgtgagaagggtcctgagtgtaggtttgctcatagcctttctgatgag
ggtgctgttagggatacaaaaccacgtagcgaacgaagacgtgttgagagcagttgctgg
ttctgcttgtcaagtccagatgttgaatcacatcttgttatcagcattggagaaggttac
tactgtgcacttgcaaaagggccacttgttccaaaccatgttctagttataccagttgag
cactgctctagtacactaaagatgcccgtggaagctgaggcagagcttgggagatataag
gatgctctggccaagtattttgagaaacaaggaaagatagctatatacttcgagtgggtt
tctcagcagtcccgccatgcaaaccttcaggctgttccagtaccattgtctaaagcatca
agtgttaaaaagatattccatttagcagcacagagactgggatttgaattttctgtagtg
aatccagatggtggtgctaaccgcgccagggaattgttaagatcagagtgtgacagcaaa
tcaagcttgttttatgttgagctaccagaaggttcggtgcttttacatttggttgacagt
aatgagaagttccctgctcagtttggccgtgaggtgttggctgggttgctaagcatggca
gatcgtgcagattggaggaactgtaaggtttctaaagaagaagaaatccagatggtggat
gattttaaacaagggtttcgtgagtttgatccagctgaatga
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