Oryza glaberrima (African rice): 127785338
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Entry
127785338 CDS
T08853
Name
(RefSeq) SKP1-like protein 5
KO
K03094
S-phase kinase-associated protein 1
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl03083
Polycomb repressive complex
ogl04120
Ubiquitin mediated proteolysis
ogl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127785338
04120 Ubiquitin mediated proteolysis
127785338
09126 Chromosome
03083 Polycomb repressive complex
127785338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127785338
04121 Ubiquitin system [BR:
ogl04121
]
127785338
03036 Chromosome and associated proteins [BR:
ogl03036
]
127785338
Membrane trafficking [BR:
ogl04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
127785338
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
127785338
Cul7 complex
127785338
Chromosome and associated proteins [BR:
ogl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
127785338
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
127785338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
127785338
NCBI-ProteinID:
XP_052168732
LinkDB
All DBs
Position
9:complement(4787502..4788299)
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AA seq
177 aa
AA seq
DB search
MAAPAAPQETNAAAGEMVTLISSDGARFEVPEAAARLSQTLLDEMKKDDYRASNGIPLPN
VAGDVLAKVIEYCTKHAATAAAINADTPAKTSKEEEELMVKSFDDEFILVDNHMLYGLLT
AADAMRIQGLMDLACQRLVDMLKGKTSEQMRQTLGITNDFTPEEEEEFRREDEEQWL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaccggcagcaccgcaggagaccaacgccgccgccggtgagatggtcacgctg
atcagctcggacggagctcgcttcgaggtgccagaggcggcggcgaggctgtcgcagacg
ttgctcgacgagatgaagaaggacgactaccgcgccagcaacgggatccctctccccaac
gtcgccggcgacgtcctcgccaaggtgatcgagtactgcaccaagcacgccgccaccgcc
gccgccatcaacgccgacacgccggcgaagacgagcaaggaagaggaagagctgatggtg
aagagcttcgacgacgagttcatcctggtggacaaccacatgctgtacggcttgctcacg
gcggcggacgccatgcgcatccaggggctgatggacctggcatgccagcgattggtggac
atgctcaagggcaagacgtcggagcagatgaggcagacgctggggatcaccaacgacttt
acgccggaggaagaagaggagtttcgccgggaggacgaggaacaatggctctga
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integrated database retrieval system