KEGG   Oryza glaberrima (African rice): 127785338
Entry
127785338         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127785338
   04120 Ubiquitin mediated proteolysis
    127785338
  09126 Chromosome
   03083 Polycomb repressive complex
    127785338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127785338
   04121 Ubiquitin system [BR:ogl04121]
    127785338
   03036 Chromosome and associated proteins [BR:ogl03036]
    127785338
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127785338
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127785338
   Cul7 complex
     127785338
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127785338
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127785338
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 127785338
NCBI-ProteinID: XP_052168732
LinkDB
Position
9:complement(4787502..4788299)
AA seq 177 aa
MAAPAAPQETNAAAGEMVTLISSDGARFEVPEAAARLSQTLLDEMKKDDYRASNGIPLPN
VAGDVLAKVIEYCTKHAATAAAINADTPAKTSKEEEELMVKSFDDEFILVDNHMLYGLLT
AADAMRIQGLMDLACQRLVDMLKGKTSEQMRQTLGITNDFTPEEEEEFRREDEEQWL
NT seq 534 nt   +upstreamnt  +downstreamnt
atggcggcaccggcagcaccgcaggagaccaacgccgccgccggtgagatggtcacgctg
atcagctcggacggagctcgcttcgaggtgccagaggcggcggcgaggctgtcgcagacg
ttgctcgacgagatgaagaaggacgactaccgcgccagcaacgggatccctctccccaac
gtcgccggcgacgtcctcgccaaggtgatcgagtactgcaccaagcacgccgccaccgcc
gccgccatcaacgccgacacgccggcgaagacgagcaaggaagaggaagagctgatggtg
aagagcttcgacgacgagttcatcctggtggacaaccacatgctgtacggcttgctcacg
gcggcggacgccatgcgcatccaggggctgatggacctggcatgccagcgattggtggac
atgctcaagggcaagacgtcggagcagatgaggcagacgctggggatcaccaacgacttt
acgccggaggaagaagaggagtttcgccgggaggacgaggaacaatggctctga

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