Oryza glaberrima (African rice): 127785345
Help
Entry
127785345 CDS
T08853
Name
(RefSeq) probable galacturonosyltransferase 4
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00520
Amino sugar and nucleotide sugar metabolism
ogl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
127785345
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ogl01003
]
127785345
Enzymes [BR:
ogl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
127785345
Glycosyltransferases [BR:
ogl01003
]
Polysaccharide
Structural polysaccharide
127785345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
127785345
NCBI-ProteinID:
XP_052168737
UniProt:
I1QPV1
LinkDB
All DBs
Position
9:17352947..17357072
Genome browser
AA seq
707 aa
AA seq
DB search
MVAVARGRRCRGVVLLLLLASVLAPLVLYGGSPVSVSTLPDSTVASGVLDRDGEYDLVVA
ASDVSLTKDLTIERLGEHKNRVLSATEDWQVVEAASKNPAFEKPDASVSRKDPGSGDANV
VITEGNGAAQSGRDGVIWEVVSRDRGADGFTQPWEINGGEERDGERVDRVKLGVSVEEQN
DGTGETGVNNIAGTHTSGNLNPSLEKERSTGRLSEQVTKAIPKESYTPTTNSNSALPTSV
SAGHSTTSPDATIRTIKDQLTRATTYLSLVASRGNHGFARELRARMRDIQRVLGDATSGG
QLPQNVLSKIRAMEQTLGKGKRILDSCSGALNRLRATLHSTEERLQSHKKETNYLAQVAA
KSLPKGLHCLPLRLTNEYYYTNSNNKKFPHIEKLEDPKLYHYALFSDNVLAAAVVVNSTI
IHAKKPADHVFHIVTDRLNYAAMKMWFLANPLGEAAIQVQNIEEFTWLNSTYSPVMKQLE
SQSMIDYYFKSGQARRDENPKFRNPKYLSMLNHLRFYLPEIFPKLSKVLFLDDDTVVQQD
LSAIWSIDLKGKVNGAVETCGETFHRFDKYLNFSNPLIASNFDPRACGWAYGMNVFDLSE
WRRQKITDVYHNWQRLNENRILWKLGTLPAGLVTFWNRTFPLHHSWHQLGLGYNPNINEK
DIRRASVIHYNGNLKPWLEIGLSRYRKYWSKYVDFDQVFLRDCNINP
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggtggcgcggggccggcgctgcaggggcgtggtgctgctgctcctcctcgcg
tcggtgctcgcgcccctcgtcctctacggcggctcccccgtctccgtctccaccctcccg
gactccaccgtggcgagcggcgtgctggatcgggatggcgagtacgatctggtggtggct
gcctccgacgtctccctcaccaaagatttgacgattgagaggctaggcgagcacaagaac
cgggtgctatcagcaaccgaagattggcaagtggttgaggcggcgagtaagaatccggca
ttcgagaaacccgatgcaagtgtatcgaggaaggacccaggatcaggggatgccaatgtg
gtgattactgaagggaatggtgctgctcagtcgggacgggatggcgttatctgggaggtt
gtcagcagggacagaggtgcagatgggtttactcaaccatgggagatcaacggaggtgag
gagcgggatggtgaaagggttgatagggtaaagttgggtgttagtgtggaagaacagaat
gatggaacaggtgaaacaggggtgaacaacattgctggaacgcacactagtggaaacctg
aatccatccctagaaaaggaaaggagcactggtagattgtctgaacaagttacaaaagct
attcccaaagagtcttacacaccaacaactaacagtaattctgctctcccaacaagtgtt
agtgctggtcattccactacttccccagacgctaccatccgcacaatcaaggaccagttg
acgagagcaacgacatatctgagccttgtagcttctagaggcaatcatggttttgcaagg
gagcttcgtgcacggatgagggatatccaaagagtgctaggtgatgcaaccagtggtggc
cagcttcctcagaatgtacttagcaaaataagagcaatggagcaaacattgggaaaggga
aagagaattcttgatagttgctcgggtgctctgaacaggctccgtgcaacccttcactca
acagaggagcgactccaatctcataaaaaggaaaccaactatctagcacaagtagcagca
aaatctttaccaaaaggacttcattgccttccgctgcggcttacaaatgagtactactac
accaactccaacaataaaaaattcccacatatagaaaagttggaagatccaaaactctat
cactatgcgttgttctcagataatgtgttggctgctgcagtggttgtaaactccactatt
attcatgctaagaaaccagcagatcatgtcttccacattgtcacggataggcttaactat
gctgcaatgaagatgtggttcttggctaatcccttgggtgaagcagccattcaggttcaa
aacattgaagagtttacatggctgaattctacctacagtccagttatgaagcagctagaa
tcacagtctatgattgattactacttcaagagtgggcaggccaggcgtgatgaaaatccc
aagttccggaaccccaagtacttgtcaatgctcaatcatctgaggttttatctccctgaa
atcttcccgaagcttagcaaggtgttattcctggatgatgacactgtagtacagcaggac
ttaagtgcgatttggtccattgatctaaaaggcaaggttaatggtgctgttgagacctgt
ggagagacctttcataggtttgataagtacctcaacttctcaaatcctcttattgccagc
aattttgacccgcgtgcctgcggttgggcgtatggcatgaatgtgttcgatctatctgag
tggagaagacaaaagattactgacgtctaccacaattggcaaagactgaacgaaaatagg
atattgtggaagctaggtactcttcctgctggtctcgtaacattttggaaccgtaccttc
cctcttcatcactcctggcatcagttgggacttgggtacaacccaaacatcaatgagaag
gatatccggagggcatctgtcatacactacaatggtaatctgaaaccctggcttgagatt
ggattgtccagatatcgcaaatactggtcaaaatacgtcgatttcgatcaagtcttccta
cgggactgcaatataaatccctga
DBGET
integrated database retrieval system
