KEGG   Oryza glaberrima (African rice): 127785434
Entry
127785434         CDS       T08853                                 
Name
(RefSeq) SKP1-like protein 5
  KO
K03094  S-phase kinase-associated protein 1
Organism
ogl  Oryza glaberrima (African rice)
Pathway
ogl03083  Polycomb repressive complex
ogl04120  Ubiquitin mediated proteolysis
ogl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ogl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    127785434
   04120 Ubiquitin mediated proteolysis
    127785434
  09126 Chromosome
   03083 Polycomb repressive complex
    127785434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ogl04131]
    127785434
   04121 Ubiquitin system [BR:ogl04121]
    127785434
   03036 Chromosome and associated proteins [BR:ogl03036]
    127785434
Membrane trafficking [BR:ogl04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    127785434
Ubiquitin system [BR:ogl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     127785434
   Cul7 complex
     127785434
Chromosome and associated proteins [BR:ogl03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     127785434
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     127785434
SSDB
Motif
Pfam: Skp1 Skp1_POZ Flu_PB2_4th CobS_N
Other DBs
NCBI-GeneID: 127785434
NCBI-ProteinID: XP_052168844
LinkDB
Position
9:complement(4862077..4871946)
AA seq 166 aa
MAASAAAADGAADGEKMILLISSDGTKFELSEAAASLSKTLGNMIEDDCATNGAIPLANV
AADILAMVVEYCNKHAAAANASGQEELIRKFDAEFVNIDRKKLFGLINAANFLNMPCLLE
LTCQRAADLIKDMMPEQVREVFGIENDFTPEEEAEVRNENAWAYEM
NT seq 501 nt   +upstreamnt  +downstreamnt
atggcagcatcggcagcagcagcagacggcgccgccgatggcgagaagatgatcctgctg
atcagctcggacggcacgaaattcgagctctcggaggcggcggcgagcctgtccaagacg
ttgggtaacatgatcgaggatgactgcgccaccaacggcgccatccctctcgcgaacgtc
gccgccgacatcctcgccatggtggtcgagtactgcaacaagcacgccgccgccgcgaat
gctagcgggcaggaggagctcatcaggaagttcgacgccgagttcgtcaacatcgacagg
aagaagttgttcggcctgatcaatgccgccaacttcctgaacatgccgtgcctgctggag
ctgacatgccagcgcgcggcggacttgatcaaagacatgatgccggagcaggtcagggag
gtatttgggatcgagaatgacttcacgccggaggaggaggccgaggtccgtaacgagaac
gcctgggcctatgagatgtag

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