Oryza glaberrima (African rice): 127785640
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Entry
127785640 CDS
T08853
Name
(RefSeq) peroxisome biogenesis protein 12
KO
K13345
peroxin-12
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127785640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ogl04121
]
127785640
Ubiquitin system [BR:
ogl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Peripheral membrane proteins
127785640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pex2_Pex12
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
Mso1_C
Motif
Other DBs
NCBI-GeneID:
127785640
NCBI-ProteinID:
XP_052169001
UniProt:
I1QVA0
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Position
10:16711996..16716920
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AA seq
394 aa
AA seq
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MLFQVGGQGARPTFFEMSAAQQLPASLRAALSYSLGVFALRRPLLHKVLDYEDEFFALLM
AVLESHSLRTTDGSFSESLYGLRRRPVKVSVKRSSSGAESNDKAYDSVLRKRQKVLSVVF
LVVLPYFKSKLQSIYNKEREARLQASLWGQGDVRFDEADLVSDQGETSQAQVEATTGEVS
NMARIKKNFAALIGVCYPWIHATNEGLSFAYQLLYLLDGTAFYSPALHALGLHVCRATGQ
ELMESSSRVSRIRNRELERLRGPPWLKTMQRVLLNCMYTSLDYAQTGLIAAVFFFKMMEW
WYQSAEERMSAPTVYPPPPPPPLPKVAKDGLPLPPDRTLCPLCCQKRNNPSVLSASGFVF
CYSCIFKSVSQHKRCPITLMPATVEQIRRLFHDL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgctgttccaggtgggagggcagggggcgcggcccaccttcttcgagatgtcggccgcg
cagcagctgccggccagcctccgcgccgcgctctcctactcgctcggggtttttgcacta
agacggccgttgttacataaagttttagattacgaggatgaattctttgccttgttaatg
gctgtccttgagtcccatagtttgcgaacgacagatggttctttttcggagtcattgtat
ggtctcaggcggagacctgttaaggtttcagtaaagagaagtagttctggtgcagaatcc
aatgataaagcctatgattctgttctaaggaagcgccagaaagtcctttctgttgttttt
ttggttgttttgccatatttcaagtcaaagctgcagtccatatataacaaagaaagggag
gccaggttgcaggcaagcctttggggtcagggtgatgttagattcgatgaagctgacctt
gtttcagatcaaggggagacttctcaagcacaagtcgaggctacaactggagaagtatca
aatatggcacgtattaagaagaattttgcggcattaataggtgtttgctatccatggatt
catgcgaccaatgaaggtctctcatttgcttaccagttgctgtatttgttggatggtact
gcattttatagtccagcactgcatgctcttgggcttcatgtttgtcgtgctacaggacaa
gagctgatggaatcatcttctagggtatcaagaatcagaaatcgagaacttgagagactt
cgtggtcctccatggctgaagaccatgcaaagggtgttacttaactgtatgtacactagc
ctagattatgcacaaactggtttgattgctgcagttttctttttcaagatgatggaatgg
tggtatcaatctgctgaggaaagaatgtcagctccgactgtatatcccccaccccctcct
ccacctctgccaaaggttgctaaagatggacttcccttgccccctgacaggacattgtgc
cccttatgctgccagaagcgcaataacccttctgttctttctgcttctggttttgtattc
tgctacagttgcatttttaagtcagtctcccagcataaaaggtgccccatcacattgatg
cctgccacagtagaacaaatcagacgcctctttcatgatttgtag
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