Oryza glaberrima (African rice): 127786034
Help
Entry
127786034 CDS
T08853
Name
(RefSeq) 3-ketoacyl-CoA synthase 1-like
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
ogl
Oryza glaberrima (African rice)
Pathway
ogl00062
Fatty acid elongation
ogl01100
Metabolic pathways
ogl01110
Biosynthesis of secondary metabolites
ogl04626
Plant-pathogen interaction
Module
ogl_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
127786034
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
127786034
Enzymes [BR:
ogl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
127786034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
127786034
NCBI-ProteinID:
XP_052169319
LinkDB
All DBs
Position
10:complement(3658572..3660583)
Genome browser
AA seq
549 aa
AA seq
DB search
MASTAAVMERERLTAEMAFPPAVVAAGGGASCKPGAEPRSIVIKIRRRLPDFARSVNLKY
VKLGLLSAGFPMPPSPSWVVMLALAAAAAYGLFDVAALYAVDLVGCAAWLCAAALLVAVW
YARRPRPVYLVEFACYKPDGDEHEISKDGFLEMTESTGFFNGEAVAFQTKITRRSGLGDR
TYLPPGIQARPPRLSMAEARAEAEAVMFGCLDKLFAATGVDPSRDVGILIVNCSLFNPTP
SLASMVVNRYRMREDVKSFNLGGMGCSAGLIAVDLARDLLQANAGALAVVVSTENITLNW
YFGNDRSMLLSNCIFRMGGAAALLSSRGGDARRAKYRLLHTVRTHKGAADGCFGSVYQRE
DERGRVGVSLARELMAVAGDALKTNITTLGPLVLPLAEQLKFLRSLVLRRVLRRGARRPY
IPDFRRAFEHFCVHAGGRAVLEEVQRSLGLGDGDMEASKCALHRFGNTSSSSLWYELAYA
EAKGRVRRGHRVWQIGFGSGFKCNSAVWRALRDVPPVSSGAGDGEEERRRVSCNPWVDSV
ESYPPKAYI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggcggtgatggagcgcgagcgcctcacggcggagatggccttcccg
ccggccgtcgtggcggccggcggcggcgccagctgcaagccgggcgcggagccgcggagc
atcgtgatcaagatccgccgccggctgccggacttcgcccgctccgtcaacctcaagtac
gtcaagctcggcctcctctccgccggcttcccgatgccgccgtcgccgtcgtgggtggtg
atgctcgcgctcgcggcggccgcggcgtacggcctgttcgacgttgccgcgctctacgcc
gtcgacctcgtcggctgcgccgcgtggctgtgcgcggcggcgctgctcgtcgccgtctgg
tacgccaggcggccgcggccagtgtacctcgtcgagttcgcctgctacaagccggacggc
gatgagcacgagatcagcaaggacgggttcctcgagatgacggagagcacggggttcttc
aatggcgaggcggtcgcgttccagaccaagatcacccgccgctccggcctcggcgaccgg
acgtacctgccgccggggatccaggcgcggccgccgcggctgtccatggcggaggcgcgc
gccgaggcggaggccgtcatgttcgggtgcctcgacaagctgttcgccgccacgggcgtc
gacccgagccgcgacgtgggcatcctcatcgtcaactgcagcctcttcaacccgacgccg
tcgctggcgtccatggtggtgaaccgctaccggatgcgcgaggacgtcaagtcgttcaac
ctcggcggcatggggtgcagcgccgggctcatcgccgtcgacctcgcccgcgacctcctc
caggccaacgccggcgccctcgccgtcgtggtgagcaccgagaacatcacgctcaactgg
tacttcggcaacgaccgctcgatgctgctgtccaactgcatcttccgcatgggcggcgcg
gcggcgctgctgtcgagccgcggcggcgacgcgcggcgagccaagtaccggctgctccac
acggtgcgcacccacaagggcgccgccgacgggtgcttcggcagcgtgtaccagcgcgag
gacgagcgcgggagggtgggcgtgtcgctggcgagggagctcatggcggtcgccggcgac
gcgctgaagacgaacatcaccaccctcggcccgctcgtcctcccgctcgccgagcagctc
aagttcctccggtcgctggtgctccggcgggtgctccgccgcggcgcgcggcgcccctac
atcccggacttccggcgcgcgttcgagcacttctgcgtgcacgccggcgggcgcgccgtg
ctggaggaggtgcagcggagcctcggcctcggcgacggcgacatggaggcgagcaagtgc
gcgctgcacaggttcgggaacaccagcagcagctcgctctggtacgagctcgcctacgcc
gaggccaaaggccgcgtccgccgcggccaccgcgtctggcagatcggcttcggctccggc
ttcaagtgcaacagcgccgtctggcgcgcgctccgcgacgtgccgcccgtctcctccggc
gccggcgacggcgaggaggagcgccgccgcgtgagctgcaacccgtgggtggacagcgtg
gagagctacccgccaaaagcatacatttga
DBGET
integrated database retrieval system