Oryza glaberrima (African rice): 127786347
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Entry
127786347 CDS
T08853
Name
(RefSeq) uncharacterized protein LOC127786347
KO
K23288
syndetin
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ogl04131
]
127786347
Membrane trafficking [BR:
ogl04131
]
Protein recycling
Others
EARP complex
127786347
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
127786347
NCBI-ProteinID:
XP_052169684
UniProt:
I1QVN0
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Position
10:20617033..20626317
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AA seq
1077 aa
AA seq
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MRGDAPAASSSSSASSPPSLFGGGDGGGGGGELFGSAPGPLVFLPLLLIQGGGMDLSRVG
EKLLSSVRSARSLGLLPPTPPPPASRPEVPARAAAAAAAARAIAGLPPHEKISLPSNSED
LVSIYGSNPQGHAVDELEEVFFQEEFDPIKYILQSIPAEGDSSYFDKQSTLRLAQLDKIA
ERLSHHVMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHVSSSKNEVSRDLVVNVKSK
KKQALLDVLPILTELRNAQDMQMELESFVEKENYFQAFQLLPEYLQILENYSGLSSVQEM
GRGIEAWLARTIQKLDTHLLGVCQTFHEESYLTVIDAYALMGDIGGMAEKMQSFFLQEVL
SQTHYVLKEMLEEEVGNNTQRNRFTYSDLCAQVPEPKLRPCLLRTFQSLFSLMCSYYTIM
SFCPGVKSIESEGENSLTGRNNTSQSADESLGDSGRGHAAEMSDRTSSSDVSNPDTSTSG
TDSPFYQLRTDAAKLVAHAFERGRRNLWQLATSRLSVLLSSSVVFSTSTYQFLKNYEDLT
IFILAGEAFCGFEASEFRQKLKGICLNYSVAFHRQNIYALKMVLERESWTIMSAEASRII
SLAGLTGDGAALISPTSRISTLPIHGSTMADTGKEKNGFAAWTKIENPFFYKVENGTTES
PKSNMMFNSVDNSSAHGSTNNGNGNKAPLDEENEDLLADFIDEDSQLPSRLAKTKIVKGN
SSHWKDGDISSQTGSSLSLLRMMDKYARLMQKLEIVNVELFKGICQLFGIFYHYIYETFG
NQDRGQSGKSLPDHQSFRLRVALSKITQDSDQWIKPQSISYSPSSPVSMDVMPTAPPSSM
FTSYGLKERCAAAETISLVARVLNRSRAHLHSVLSQSNTSILEEFFGTMVDSVPDLAEHI
HRTSARMLLHINGYPDKIANAKWEVKELGMEHNGYVDLLLGEFKHYKTRLDHGGISKELQ
DLLLEYGIDSIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLLHIVSANVRPKLQIVD
TFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRLETIERIEAGP
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcgacgcgcccgccgcctcctcctcgtcatcggcatcgtcacccccctcgctc
ttcggcggcggagacggcggcggcggcggcggcgagctgttcgggtccgcgcctgggccg
ctcgtcttcctgcccctgctcctgatccagggcggcggcatggacctctcccgcgtcggc
gagaagctcctcagctccgtccgctccgcgcgctccctcggcctcctccctcccacccca
ccgccgcccgcctcccgccccgaggttccagctagagctgcggcggcagcggcggccgca
cgtgcgatcgctgggctgccaccgcacgagaagatcagcctgccttcgaattcggaggac
ttggtctccatctacgggagcaacccgcaggggcatgccgtggatgagctcgaggaggtg
ttctttcaggaggagttcgacccaataaagtacattctgcaaagtatccctgcagagggt
gattccagctatttcgataagcagtctactttgagattagcgcagctcgacaaaattgca
gaacgactatcacatcatgttatgggtcatcatgaagaaatggtgaaggggatgcagtta
gtgatggagttagaacaagatttaaaggttgcaaatgtgatctgcatgaatggacggagg
catgtatcctcttcaaagaatgaggtatcaagggatctggttgtcaatgtaaaatcaaag
aagaaacaagctttgctggatgttcttccaattcttacagaacttcgtaatgcacaagac
atgcagatggaacttgaaagttttgtggagaaagaaaactattttcaggcgtttcaatta
ttgcctgaatatttgcaaatcttggagaactattcaggcctttcttctgtacaagaaatg
gggcgtgggattgaggcatggttggcacgaacaatccaaaaattagacacccatttacta
ggggtttgtcagaccttccatgaggaaagctatctaactgttattgatgcctatgcactg
atgggtgacatcggtggcatggctgaaaagatgcagagtttctttttgcaagaagtactc
tctcagactcattatgtcctgaaagaaatgttggaagaggaggttggaaataatacgcag
agaaatagatttacatatagtgatctttgtgctcaagttcctgagcccaagctccggccc
tgcttattaagaacctttcagagtttgttttcgttgatgtgctcatattatactataatg
agcttttgcccaggagtaaagagtatcgagtccgagggcgaaaactctctgacaggaagg
aacaacacatcccagagtgcagatgaatcattaggtgattcaggtagaggtcatgcagct
gaaatgagtgacaggacatcatcttctgatgtcagcaatcctgatactagcacatcagga
acagattcaccattctatcagctaaggacagatgctgcaaaacttgttgcacatgcattt
gaaagagggcggagaaatctttggcaactagcaacaagtcgcttatctgtattactgtcc
tcttcagttgttttctcaactagcacctatcaatttttgaagaactacgaagatctcacc
atttttatcttggctggtgaagcattttgtgggtttgaagcgagcgagttccggcaaaag
ttgaagggtatctgtttgaactattcggtggcctttcaccggcaaaatatctatgcacta
aagatggtactggaaagggaatcttggacaataatgtctgctgaagcatcacggataatt
agtttagcaggccttaccggtgatggtgctgctctaatctcaccaaccagtcgtatctcc
accttgccaatacatggttctactatggctgatacagggaaggaaaaaaatggatttgct
gcttggactaagattgaaaacccatttttttacaaggtagaaaatggcaccacggaatcc
ccgaagtccaatatgatgttcaactcagttgacaatagttctgcccatggaagtactaac
aatggcaatggaaataaagcacctcttgacgaagagaatgaagaccttcttgcagatttt
attgatgaagatagtcagttgcctagtaggttagcaaaaacaaaaattgtgaaaggcaat
tcttcccattggaaggatggggacatttcatcacagacaggatcatcgctttctttatta
aggatgatggataaatatgccagattaatgcaaaagctggaaattgtcaatgttgagctt
tttaagggtatctgccaactgtttggcatcttttatcactacatatacgagacatttggg
aaccaggacaggggtcaaagtggcaagtctttacctgatcatcaatcgtttcggcttaga
gtggctttgtcaaaaataacacaagactctgaccagtggatcaaaccacagagtatttca
tattcaccttcatcacccgtatcaatggatgtgatgcctactgcgcctcccagctcaatg
ttcacctcgtatggtttgaaggagcgctgtgcagctgctgaaacaatatcattggttgct
cgagttttgaacagatctcgagcacatctacattccgttctgtctcaaagtaacacttcc
attcttgaagaattctttgggacaatggttgactctgttccagatttggctgagcacatt
catagaacaagtgcaaggatgcttttgcatatcaatgggtatccagataagattgcaaat
gccaaatgggaggtcaaggagcttggcatggagcataatggctatgttgatttgttattg
ggtgaattcaagcactacaaaactagattggaccatggaggaatttccaaggagctccaa
gacctcttgctggagtatggcatagatagcatcgcagaagttttagttgaaggtctctct
agggtaaaacggtgcacagatgaaggacgggctttgatgtcactggaccttcaggtacta
attaatgggctgctgcacattgtatccgcaaatgttaggccaaagctgcaaattgtggat
actttcataaaggcttattatttgccagagaccgagtatgttcattgggcacggtctcat
ccagaatacagcaaaagtcaggttgtcgggttggttaacctggttgcgactatgaaagga
tggaaacggaaaacgaggttagaaaccatcgagaggattgaggcaggaccatag
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