Oryza glaberrima (African rice): 127786453
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Entry
127786453 CDS
T08853
Name
(RefSeq) homeobox-leucine zipper protein HOX9 isoform X1
KO
K09338
homeobox-leucine zipper protein
Organism
ogl
Oryza glaberrima (African rice)
Brite
KEGG Orthology (KO) [BR:
ogl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogl03000
]
127786453
Transcription factors [BR:
ogl03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
127786453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
START
MEKHLA
Homeodomain
ZPR
bZIP_1
KxDL
HAUS-augmin3
Homeobox_KN
CCPG1_N
HALZ
Motif
Other DBs
NCBI-GeneID:
127786453
NCBI-ProteinID:
XP_052169824
LinkDB
All DBs
Position
10:17587272..17594457
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AA seq
875 aa
AA seq
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MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL
RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS
QLVHENAYMKQQLQNVCLRVVELTSCFGWKRRCPFFVFSPAHIISVHCLQPSLGNDTSCE
SNVTTPQNPLRDSSNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPDSFGIVAVS
HGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYMQMY
APTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQFVRAEMLPSGYLVR
PCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVV
YALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNAKKVRNTSTSA
NAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYSASSLKTSSCSLPGL
RPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKSMG
SCFQLVFAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASSLEVGSTAQPTGD
ASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQYVRSIVSSVQRVSMAISPSRSGLNAG
QKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYEDAILCCSFKEKP
VFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSG
MGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtggcgatgcggagcggcagcggcagcgacggcggcggcggcgggtac
gacaaggccgggatggactccggcaagtacgtgcggtacacgccggagcaggtggaggcg
ctggagagggtgtacgccgagtgccccaagcccagctcctcccgccgccagcagctgctc
cgcgactgccccatcctcgccaacatcgagcccaagcagatcaaggtctggttccagaac
agaaggtgccgagataagcagcggaaggaggcatcaaggcttcaggccgtgaaccgaaaa
ttgacggcgatgaataagcttctcatggaggagaatgagcgtcttcagaagcaggtctcc
cagctggtccatgagaacgcgtacatgaagcagcaacttcagaatgtatgtcttcgtgtt
gttgagctcacatcgtgcttcgggtggaaaaggcgctgccctttctttgttttctcgcct
gctcatatcatctctgttcattgtttgcagccgtcattgggcaatgatacaagctgtgaa
tcaaatgtgaccactcctcagaaccctctgagagattcaagtaacccgtctggactcctt
acaattgcggaggagaccctgacagagttcctctccaaggctacagggactgctgttgat
tgggtgccaatgcctgggatgaagcctggtccggattcgtttggtattgtggccgtttca
catggttgccgtggtgttgctgcccgtgcctgtggtttggtgaatctagaaccaacaaag
atcgtggagatcttaaaagaccgcccatcttggttccgtgattgtcgaagtcttgaagtc
ttcacaatgtttccagctggaaatggtggcacgatcgaacttgtttacatgcagatgtat
gctcctactactttggttcctgcacgagatttttggacacttagatacacaactacaatg
gaggatggcagccttgtggtctgtgagagatcattgagtggttctggaggtggtccaagt
acagcctccgcacagcaatttgtaagagctgagatgcttcctagcggctatctagtgcgc
ccatgcgagggtggtggctccatcgtgcatattgtggaccatctggatcttgaggcttgg
agtgttccagaagtgcttcggccactctacgagtcatctagggtagttgctcagaaaatg
actactgcagcactacggcacatcagacaaattgctcaagagacaagcggggaggttgta
tatgctttggggaggcaacctgctgttttgcggacatttagtcagaggttgagtagaggc
ttcaatgatgctataagtggtttcaacgatgatggttggtctgtcatgggtggggatggc
attgaagatgtgatcattgcttgcaatgcaaagaaggttaggaatactagcacttcggcc
aatgcttttgtaactccaggaggtgttatatgtgctaaggcatccatgctactgcagagt
gtcccacctgcagttttggttcgatttttgagggaacatcgttctgaatgggcggattat
aacttcgatgcatattcagcttcatctctgaagacaagctcatgttcacttcctgggttg
cggcctatgagattttctgggagccagatcattatgccacttgctcacacggtggagaat
gaggagattttagaagttgtccgtcttgaaggacaagcacttacacatgatgatggtctt
atgtctagagatattcacctgcttcagctttgcactggaatagatgagaaatcaatggga
tcctgcttccagcttgtctttgcaccaatcgatgagcttttccctgatgatgctccatta
atatcttcaggctttcgtgttataccgctggacatgaaaacagatggtacacctgctggt
agaacattagatttggcatctagccttgaagttggttcaactgcacagcccacaggggat
gcatctatggatgactgtaatctacgatcagtgctgacaattgcctttcagttcccttat
gaaatgcatctccaagacagcgttgcaactatggcccggcaatatgtccgcagtattgtt
tcctctgttcagagagtatcaatggctatttctccttctcggtctggcttgaatgctggg
cagaagataatttcaggcttccctgaagccccaacgctagctcgttggatttgccaaagc
taccagttccatttgggggtggagttacttaggcaggcagatgatgctggggaagcacta
ttgaaaatgctatgggattacgaagacgctattttgtgctgttctttcaaggaaaagcct
gtgtttacttttgccaacgagatgggactaaacatgctagaaacatctctcgtcgctctc
caagatctctcactggacaagatatttgatgaagccggtaggaaggccctatacaacgag
atcccgaaattgatggaacagggttacgtgtacctgcctggtggagtgtgcttgtccggg
atggggcgccatgtttctttcgagcaagctgtagcatggaaggtgctcggagaagacaac
aatgtgcactgcctcgccttctgcttcgtcaactggtccttcgtgtga
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