Oncorhynchus gorbuscha (pink salmon): 123989375
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Entry
123989375 CDS
T07892
Symbol
rapgef1b
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo04510
Focal adhesion
ogo04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123989375 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
123989375 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
123989375
NCBI-ProteinID:
XP_046146292
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All DBs
Position
LG11:71764165..71845004
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AA seq
1185 aa
AA seq
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MSGKIESKQDSQRSHLSSFTMKLMDKFHSPMIKRTPSKKGKQLQVEPVVKSQEKPVNKKV
SRLEEQEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARITHNSA
VSSCHNRVYQSLANLIRWSDHVMLDGINLDDKDNVVAVTTVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNRPPAPPITTPESRSELPLTEREREILSKTPLTEAVTDMAEEDVAPPKPPLP
GLKMDALSPPPALPPKKRQSASSPTRVAVVATMSRGSSLPCSVHSQQQDYEQEFLQRRFS
GGSQSYGCDSQRLSPYSSMGKLSRSEEQLCSMEQDSGQCSRNTSCETLDNTESYDPDYDF
LHQDLAVFTGDTHLPSTTTPSGVMYLSPLPESHSECSSPVPPHAQFRHHPPHTTNNPTHP
SLSTGPPSPVPTSSPCNYPASVLLQHYPRRSGAAPRFHLIRMGVAPRGTLNERSPSQYEN
LSEEELLHPTPPFPLFTPNSPMPQSNGGVFVTQYLASENADLPSSPPPLPEKRNKHVLAY
MQFVEDYSEPQPSVFYQTPQNESIYEQRNKRFQDVYGLNDSFSSTDSVHEPLPIPLFPPP
ALPPKKRQLPSLVVAAEDAGSGLGLILSVSSSSYLSGHASLTTPMSSDQVALTNATILDG
SRGGPNGSLANSLGSVAICLPPPETTSLLTDSLLRTSAVSVDEGGEGEYVNLYSSSQANG
ELELPPCLRPIAADDVIQDPAPQMQSSNSKEALDKDSRRQKSTDSVQSDEEEVDELSLID
HKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVLYCEVFLTTYRTFISPEDL
IKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRLVDELCLVELTEDILKQLMDLVFRLVCN
GELSLARVLRKNILDKVEQKKLLRCTNSLKPLAARGVSARPGTLHDFRSHEIADQLTLLD
AELFYNIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQEKGQDREKLLLK
FIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRVYRA
ALADVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQFNILDSMRRFQQVHYDL
KRNDDIVCFFNDFSDHLAEEALWELSLKIKPRNITRRRTEREEKT
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatcgagagtaagcaagactcgcagcgctcccacctctcctccttcacc
atgaagctgatggacaagttccactctcccatgatcaagaggacgccatcgaagaagggc
aagcagttgcaggtcgaaccagtggtcaagagccaagagaaacccgtcaacaagaaggtg
agtcggctggaggagcaggagaaggaggtggtgagcgcactacgctacttcaagaccatc
gtggacaagatggtggtggagaagaaggtgctggagatgctgcctggctcggccagcaag
gtgctggaggctattctacctctggtgcaggtggaggcccggataacacacaattcggct
gtgtcgtcgtgtcacaaccgggtgtaccagagccttgccaacctgatccgctggtccgac
cacgtcatgctggacggcatcaaccttgatgacaaggacaacgtggtcgcggtcacgaca
gtcatcaaagccgttctggatggggtcaaggagctggtcaaactcactatagagaaacag
gagcaaccctcccccaccacacccaacagacccccagcaccacctatcactacaccagag
agcaggtcagagttgccactgacagaacgggagagggagatcctgagtaagaccccgctc
accgaggctgtgacggacatggcagaggaggacgtagctccgcccaaaccccccctccct
ggcctgaaaatggatgcgctcagccctcctccagctttgcccccaaagaagcgtcagtcg
gcctcgtcgcccacccgtgtagcagtggtggccaccatgagccgcggctccagcctgccc
tgcagcgtccacagtcagcagcaggactatgagcaggagttcctccagaggcgtttctca
gggggcagccagtcgtatgggtgcgactctcagcgcctctcgccctacagcagcatgggg
aagctcagcaggtctgaagagcagctctgctccatggaacaggacagtggacagtgctcc
agaaatactagctgtgagacactggacaacacagagagttacgaccccgactatgacttc
ctccaccaggacctcgctgtcttcacaggggacacccacctgccctccactaccaccccc
tcaggggtcatgtacctgtcccccctccccgagtcccacagtgagtgctcctcccccgtg
cctcctcacgcccagttcaggcaccacccgccccacaccaccaacaaccccacccacccc
agtctgagtactggaccccccagcccggttcccacatcatccccttgcaactatcccgca
tcagtgctcctccagcattaccccagaagaagcggcgcagctcccaggtttcaccttatc
aggatgggtgtggctcctcgggggaccctcaacgagaggtccccttcccaatacgaaaac
ctgtcggaggaggagctgctgcaccccacgccaccctttcccctcttcactcccaactcg
cccatgccccagagcaacgggggggtgttcgtgacccagtacctggctagcgagaacgcc
gacctgccctctagtccaccgccactgcctgagaagaggaacaagcacgtcctggcgtac
atgcagtttgtggaggactactcagagccccagccctcagtgttctaccagaccccacag
aatgagagcatctatgagcagaggaacaaacgcttccaggacgtctatggcctcaacgac
tccttcagcagcaccgactcggtccacgagccccttcccatacccctcttcccgcccccc
gccctgccccccaagaagaggcagctgccgtcattggtggtggcggcggaggatgcgggc
tctggcctaggcctcatcctatcggtttctagctcctcctacctgagtggacatgcctcg
ctgaccacgcccatgagttcagaccaggtcgccttgaccaatgccactatattggatggc
agcaggggcgggcccaacggttccctggccaactcattgggctctgtggccatctgtctt
cctcctcctgagaccacttctcttctaactgactctctcctccgcacctcggcagtgagc
gtcgacgagggtggcgagggcgagtatgtcaacctgtactcatccagccaggccaatggg
gagctggagctgcctccctgcctcagaccaatcgctgctgatgatgtcattcaagacccc
gccccacaaatgcaatcctccaatagcaaggaggctctggacaaggacagcaggaggcag
aagtcgacagactcggtccagagcgatgaggaggaagtggatgagctctctctcatcgac
cacaaagagatcatgtcccggataacactcaaacaggagaatgacgatggacctgatgtg
cgtgctggatcaggggatattctgttagtccacgccacagagacagaccgcaaagatctg
gtgttgtactgtgaggtcttcctgaccacatacaggaccttcatcagcccagaggacctc
attaagaagctccactacagatacaccaggttctgtcacagtccagacacgtttaagaag
cgggtcagcaagaacaccttctttgtgctcgttagactggtggacgaactgtgtctggtg
gagttaacagaggacatcctgaagcagctgatggacctggtgttcaggctggtgtgtaac
ggcgagctgagcctggcccgcgtgctccgcaagaacatcctggacaaggtggagcagaag
aagctgctgcgctgcaccaactccctcaagccgctggccgcccggggcgtgtccgccagg
cccggcacgctgcatgacttccgcagccatgaaatcgcagatcagctcacgctcctggat
gcagaacttttctacaacatcgagattcctgaggtgttgctttgggccaaggaacagaac
gaggaaaagagtcccaatctgactcagttcacagagcactttaacaatatgagctactgg
gtgcgctctctaatcattcagcaggagaaaggccaggacagagagaagctgctcctcaag
ttcattaagatcatgaagcacttaagaaagttgaacaatttcaactcgtacttggcaata
ttgtctgccctggactcagcccccatccgcagactggagtggcagaaacagacatcagag
ggattggaggaatactgcactttgattgacagctcgtcgtctttccgagtgtacagggcg
gctctggccgacgtggagcctccatgcatcccatacctcggtctaatcctgcaggacctg
accttcgtccacctggggaaccctgatctcatcgatgggaaggtcaacttttctaagcgc
tggcagcagttcaacatcctggacagcatgaggcgcttccagcaagtgcattatgatctg
aagcgcaacgacgacattgtgtgcttcttcaacgacttcagcgaccacctggccgaggag
gcgctgtgggagctctcactgaagatcaagcctcgaaacatcacccggaggcggacagag
cgggaagagaagacctag
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integrated database retrieval system
