Oncorhynchus gorbuscha (pink salmon): 123989493
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Entry
123989493 CDS
T07892
Symbol
ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ogo03036
]
123989493 (ddx4)
Enzymes [BR:
ogo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123989493 (ddx4)
Chromosome and associated proteins [BR:
ogo03036
]
Eukaryotic type
Gene silencing
piRNA pathway
123989493 (ddx4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CCDC154
Motif
Other DBs
NCBI-GeneID:
123989493
NCBI-ProteinID:
XP_046146501
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All DBs
Position
LG11:77029238..77042131
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AA seq
646 aa
AA seq
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MDNWDEVTTSNESGMSSWTSGGQSSSFGRPTDKVSSWNSGGGGFGGGRGRGSRGGGGDFK
SFSSGAGENGNADSSWNSDGGFRGRGRGGGRGSRGGGIRNGDDGDGGFGGSQGGRGGRGG
FRSGGGDGGGFGGGGYRGRDEEVFSKGSTMDGDGGGDGGNPGPPKVTYVPEALCEKESSI
FAHYESGINFDKYDDILVDVSGSNPPKAIMGFEEAALCESLNRNVSKSGYKKPTPVQKHG
IPIIAAGRDLMACAQTGSGKTAAFLLPILQQLMVDGVAASQFSEIQEPEVIIVAPTRELI
NQIYMEARKFAHGTCVRPVVVYGGISTGYTIREILKGCNVLCGTPGRLLDIIGRGKIGLS
KLRYLVLDEADRMLDMGFEPAMRRLVGSPGMPAKEHRQTLMFSATYPEDIQKLAADFLKK
DYLFLAVGVVGGACSDVEQVVVQVTKFSKRDQLLEVLKTTGSERTMVFVETKRQADFIAT
FLCQEKVNTTSIHGDREQREREQALGDFRSGRCPVLVATSVAARGLDIKDVQHIVNFDLP
NNIDEYVHRIGRTGRCGNTGRAVCFFDPEADSNLARSLVKVLSGAQQEVPKWLEEAAFSA
HGTTGFNPGGRTFASTDSRKGGSFQRDGASHLAAALSSGADDDEWE
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggacaactgggatgaggttaccacaagtaatgaaagtggaatgagctcgtggaccagt
ggtggccaaagttccagttttgggagaccgactgataaagtcagctcctggaacagtgga
ggtggtggctttggtggcggcagaggccgagggtccaggggaggtggtggagacttcaag
agtttttcttcaggagctggtgagaatgggaatgcagacagctcctggaacagtgatgga
ggcttcaggggaagaggcagagggggcggcagaggatcaaggggaggaggcatccgaaat
ggggatgatggcgatggtgggtttggaggtagccagggaggcagaggtggcaggggaggc
ttccggtcaggtggtggtgatggaggaggatttggcggaggaggttatcgtggacgagat
gaagaagttttctctaaaggctcaaccatggatggagatggtggtggagatggtggcaat
ccaggtcccccaaaggtgacctatgtgcccgaagccctctgtgagaaggagtcgtctatt
tttgctcattatgagtcgggcatcaactttgataagtacgatgacatcttggtcgatgtc
agcggcagcaatccgccaaaggcaatcatgggttttgaagaggctgccctgtgtgaatct
ctgaacaggaacgtcagtaagtctggctataagaagcccaccccagtacagaagcatggc
attcccatcatcgctgctggccgggacctcatggcctgtgcccagactggatctgggaaa
acggctgcattcctactgcccatcctgcagcagctgatggtggacggcgtggcagctagt
cagttcagcgagatccaggagccagaggttattatagtggccccaaccagggagctgatc
aaccagatctacatggaagccaggaagtttgcccatggaacttgtgtgcgtccagtggtg
gtttacggtggcataagcaccggttacaccattcgtgagatactgaagggctgcaatgtg
ctctgtgggactccaggaagactgctggacattattggaagaggaaagattggcttgagc
aagctgcgttacctggtgctggacgaggctgacaggatgctggacatgggctttgagcct
gcgatgcgcaggctggtggggtccccaggcatgccagctaaagagcaccgccaaaccctt
atgttcagcgctacctaccccgaggacatccaaaaactggctgctgacttcctgaagaag
gactatctgttccttgctgtgggtgtggtgggtggagcctgcagtgatgtggagcaggtc
gtggttcaggtgacaaagttctccaaaagagaccaactactggaggtcctgaagactaca
gggtctgaacgcacaatggtctttgtggaaaccaagaggcaggctgactttatagcaacg
ttcctgtgtcaggagaaggttaatactactagtattcacggtgaccgtgagcagagggag
cgtgaacaggcactcggcgacttccgctcaggaaggtgtcctgtcctggtggccacctct
gttgctgcccgcggactggacatcaaggatgtccaacacatagtcaactttgacctcccc
aacaacattgatgagtacgtccaccgcatcgggagaacaggtcgctgtgggaacaccggg
agagctgtgtgtttctttgacccggaggctgacagcaacctggcacgctccctggtcaaa
gtcctgtctggggcccagcaggaggtgcccaaatggctggaggaagctgccttcagtgct
catggcaccacagggttcaacccaggtggcagaacctttgcctctactgatagcaggaag
ggtggctctttccagagagatggggcaagtcatctagctgctgccctgagcagtggcgca
gacgacgacgaatgggagtga
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