Oncorhynchus gorbuscha (pink salmon): 123989524
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Entry
123989524 CDS
T07892
Symbol
sptlc1
Name
(RefSeq) serine palmitoyltransferase 1 isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo00600
Sphingolipid metabolism
ogo01100
Metabolic pathways
Module
ogo_M00094
Ceramide biosynthesis
ogo_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
123989524 (sptlc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ogo01007
]
123989524 (sptlc1)
Enzymes [BR:
ogo01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
123989524 (sptlc1)
Amino acid related enzymes [BR:
ogo01007
]
Aminotransferase (transaminase)
Class II
123989524 (sptlc1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
PAD
Motif
Other DBs
NCBI-GeneID:
123989524
NCBI-ProteinID:
XP_046146552
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All DBs
Position
LG11:complement(78570426..78588833)
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AA seq
472 aa
AA seq
DB search
MASGQQWVLVEMVQALYEAPAYHLVLEGILILWIIRLLFSKTYKLQERSDLTEKEKEDLI
EEWQPEPLVPPMSKDHPSLNYDIVTGPPSHKIIVNGKECINFASFNFLGFLDNERVKQKA
LTSLRRYGVGTCGPRGFYGTFDVHLELEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR
GDIVFVDEAACFSIQKGLQASRSFIKYFKHNDMEDLERLLKEQEIEDQRNPRKARVTRRF
IIVEGLYINTADVCPLPDLVKLKYKYKVRIFLEESMSFGVLGEHGRGVTEHFGVNIDDID
LISANMENAVASIGGFCCGRSFVIDHQRLSGQGYCFSASLPPMLAAAAIEALNIMEEDPE
IFTILREKCKHVHKALQEIPGVKVIGEVYAPALHLQLERSSGSRDSDVRMLRSIVDYCLE
RQIALTLARYLDKEERFLPPPSIRVVVTIEQTEEDIEKAASCIREAALAILK
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggcagcagtgggtgttagtggagatggtacaagcactctacgaggcacct
gcctatcatctggtcctggaggggatcctcatattgtggatcatcagactgctgttttca
aagacgtacaaactacaggaacgttcagacctcacagagaaggaaaaggaggacttaatt
gaagaatggcaaccagaaccccttgtccctcctatgtccaaagaccatccttccctcaat
tatgacatcgtcactggcccaccaagccacaaaatcattgtaaatggaaaagagtgcatc
aactttgcttcatttaacttcttgggtttccttgacaacgagcgagtgaagcaaaaggcc
ttgacttctctcaggaggtatggtgttggtacctgtggtccaagaggtttctatggaacc
tttgatgtccacttggagttagaggatcgtttggccaagttcatgaaaacagaggaggcc
atcatctactcctatggctttgcaacgatagctagtgctatacctgcctactccaagaga
ggagacatagtgtttgtggacgaggcggcatgtttctccatacaaaagggtctccaagcc
tcccgcagtttcatcaagtacttcaaacacaacgacatggaagatctggagagactgctc
aaagagcaggagatcgaggatcagaggaatcctcggaaggccagggtgaccaggaggttc
atcatagtggaggggctctatataaacactgcagatgtttgtccccttccagacctggtg
aagctgaagtacaagtacaaggtccgcatcttcctggaggagagtatgtcgtttggggtg
ctgggagaacatggcagaggggttacagaacactttggggtcaacattgacgatattgac
ctcattagtgccaacatggagaacgctgtggcttccatcggcggcttctgctgtggaagg
tcgttcgtcatagaccatcagcgtctgtcaggccaggggtactgtttctctgcctccctg
ccccccatgctggctgctgcagccatagaggcccttaacatcatggaggaagacccagaa
atttttaccatcctgagggagaagtgcaaacacgtccacaaagcgttgcaagagattcct
ggggtgaaggtaataggggaagtttatgcccctgcccttcacctacagctagagagaagc
tctggatccagagactctgacgtgaggatgcttcgcagcatcgtagactactgtttggag
agacagatcgcactcaccctagctcggtacttggataaagaggagcggtttctccctccg
ccttcgatccgggtagtggtcaccatcgagcagactgaagaggacattgagaaagctgca
tcctgtatcagagaggctgctctggctatcctcaaatga
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