Oncorhynchus gorbuscha (pink salmon): 123989530
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Entry
123989530 CDS
T07892
Name
(RefSeq) LOW QUALITY PROTEIN: A disintegrin and metalloproteinase with thrombospondin motifs 19-like
KO
K08633
a disintegrin and metalloproteinase with thrombospondin motifs 19 [EC:3.4.24.-]
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ogo01002
]
123989530
Peptidases and inhibitors [BR:
ogo01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
123989530
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_C
ADAMTS_spacer1
ADAMTS_CR_2
Reprolysin
TSP_1
Reprolysin_5
Reprolysin_3
Pep_M12B_propep
Reprolysin_2
Reprolysin_4
TSP1_spondin
Peptidase_M10
PLAC
ADAMTS_CR_3
TSP1_CCN
DUF3810
Motif
Other DBs
NCBI-GeneID:
123989530
NCBI-ProteinID:
XP_046146560
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All DBs
Position
LG11:complement(78980823..79117675)
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AA seq
1161 aa
AA seq
DB search
MHLKRIFSLLHQLCFLGAFAIADPHPFQESESEIIFPEVFPDTGPPAPDKPNSRETDASA
GAPDKPTSRETDASAGSSSREIRSISNWEEYESPELYHWEPQGPQTAASTGLRLRIPAFG
RDLHLILKRDTRFLSQKFMVESRQKAQKASRSSMPVSSAANTEERGCYYSGTVLNYAGSI
ASFSTCAGLMGFIQLNGDFLYIEPVNKTLAVTGQAHRVYRRKRSTTEERQTDKQTTDKQT
SSNYCGVIPERQKSKNRKLSEGGRGKRYLYKLLHEYNVETVVVADPAMVSYHGSEAAKRF
ILTIMNMVFNLFQHKSLGIQINIRLTKLVLLHETPSDMYIGHHGEKMLESFCRWQQEEYG
KKSVMSDFSTRWREDLPSVDTAILITRKDFCVHKDEPCDTVGIAYLSGMCSERRKCILAE
DNGLNLAFTIAHEMGHNMGVSHDNDHQSCADGLHIMSGEWVKGQNLGDVSWSGCSRDDVE
KFLRSKASSCLLQTDPLSLNSVILPFKHPGMTYTAEEQCQILFGTTASHCQNMQYVMCSG
LWCRVDGEKDCKTKLDPPMDGTECDPGKWCRAGECVSRAVPVEQAMGEWSTWGSWGTCSP
TCSTGISGRQRKCESPSGKSRDCVGSRMQYRLCENLPCPAGSPSFRDQQCQTFNRPSLHW
HSVMDDERPCTLFCSSTGKEQPRLLAEKVLDGTSCGSQESGLCANGTCQKVGCDRILSSM
AREDHCGVCNGNGKSCKVIKGNFNHTKGAGYVEAVIIPKGARRIRVMEEKPAQSYLALKD
TNKHSINSDWKIDRPGAFNMAGTTVHYVRRGLWEKMSARGPTTSPLHLMVLLFNEQNHGI
HYEYTIPTEASMEPQGGLGPGAMPSEPLFMWTHSGWEDCHAVCGGGERKTIVTCTNIVNK
TTSVVDNRRCRHLTKPEPQVRKCNEQPCQTRWMMTEWTSCSRTCGRGSQSRQVACTLQLA
NGTLVKAKDRDCAGPKPAPNQRCEGQDCLTVWEAGVWSECSVKCGRGARHRLVKCTNPRK
KCDLSTLPRETEDCEDYSKCYIWRTGDWAKCSVTCGKXLQSRVIQCMHKSPGSHGEECFS
FIEKPAGEDRPCQQQACNERINLNXITSPRLAALTFKCLRDQWPVYCKVIREKNLCQDMR
WYQRCCETCRDFYAQKMQQRS
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgcatctaaagcgcatcttcagtctcctccaccagttatgttttcttggagcatttgcc
attgcagatccacaccccttccaggaatccgagtccgaaattattttcccggaggttttt
ccagatacaggtccaccggctcctgataaaccaaatagccgagagactgacgccagcgcc
ggagctccggataaaccaactagccgagagactgacgccagcgccgggagcagctctcgg
gagattcgttccatttcaaactgggaagagtacgaatctccagagctataccattgggaa
cctcaaggaccgcaaacggctgcttccacagggctgagactcagaattcctgcttttggc
agggacctgcacctcatcctgaagagagacactcgatttctgtcccagaaattcatggtg
gagagcagacagaaagcacaaaaggcatctcggagcagtatgccagtttcgtccgctgcc
aacacagaagagagaggatgctattacagcggaactgttcttaattacgcaggatccatt
gcctcattcagcacctgcgcaggactgatgggcttcattcaactcaatggagacttcctc
tacatcgagcctgtcaataaaacgctggccgtcacgggacaggcccaccgcgtgtacagg
aggaagcgctccaccaccgaggagagacagacagacaagcagacgacagacaaacagaca
agcagcaactattgtggagtcattccagaaagacagaagagtaagaacaggaagctgtct
gagggaggcagagggaaacggtacttgtataaactactccacgagtacaacgtggagact
gtggtggtggccgacccagctatggtcagctaccacggctcagaggcagccaaacgattc
atcctcaccatcatgaatatggttttcaacttgtttcagcacaagagcctgggaatacag
attaatatcagattgactaaacttgtgctgcttcacgaaacaccatcagacatgtacatt
ggtcaccatggtgagaagatgctggagagtttctgtcgttggcagcaggaggagtatggg
aagaagagtgtgatgtcagacttcagcactcggtggagggaggacctaccctctgtggac
acggccattctaatcacacggaaggatttctgcgtgcataaagatgaaccctgtgacact
gtaggcattgcctacctgagcggcatgtgcagcgagagaaggaaatgcatcctagctgag
gacaacggcctcaacctagcctttaccatcgctcacgaaatgggccacaacatgggtgtg
agtcacgacaacgaccaccagtcatgtgcggacggcctccacatcatgtcgggagaatgg
gtcaaaggtcagaacctgggcgatgtttcctggtctggctgtagccgtgacgacgtggag
aagttcctccggtccaaggccagtagttgtctcctccagaccgacccgctgagcttgaac
tcagtgatcctgccattcaaacacccagggatgacttacacggcagaggaacagtgtcag
atcctcttcggaaccaccgcctcccactgtcaaaacatgcagtatgtgatgtgttcaggg
ctgtggtgccgggtggatggagagaaggactgtaaaaccaaactggacccacccatggat
ggcacagagtgtgacccaggaaagtggtgtcgtgctggggagtgtgtgagcagagcggtg
ccagtggagcaagccatgggagagtggagcacctgggggtcctggggaacctgcagtcca
acctgcagcactggcatcagtggacgccagcgcaagtgtgagagtcccagtgggaaaagc
cgggactgtgtcggctccaggatgcagtacaggctgtgtgagaacctaccctgccctgct
gggagccccagcttcagagaccaacaatgccagaccttcaatcgcccctccctgcactgg
cactccgtcatggatgatgagaggccctgtacactgttctgttcctccacagggaaagaa
caaccccgcctcctggctgagaaggtgctggatggaacctcctgcggctctcaggagtca
ggcctctgtgccaacgggacatgtcagaaagtgggctgtgacaggatcctgagttcgatg
gcaagagaggaccactgtggggtgtgtaatggcaacggcaagtcttgtaaagtcatcaag
gggaacttcaaccacaccaaaggagcaggctatgtggaagctgtgatcatccccaaaggg
gccaggagaatcagagtgatggaagaaaagcctgcacagagttatttggcactcaaagac
acaaacaagcattccatcaacagcgactggaagatagaccgcccaggagccttcaacatg
gcgggcaccaccgttcactacgtccggagaggactgtgggagaaaatgtcagccagaggt
cccactacctccccgttgcatctcatggtgctgctgttcaatgagcagaaccatggcatc
cattacgagtacaccatccccacagaggctagcatggaaccccagggggggttaggaccg
ggggccatgcccagcgaacccctcttcatgtggacccactctggctgggaggactgccat
gccgtgtgtggaggaggagaaagaaagacaatcgtcacctgcactaacattgtcaacaaa
actacaagcgtggtggacaaccgaagatgtcgtcacctgaccaaacctgagcctcaagtc
cgcaagtgcaatgagcagccctgccagacaaggtggatgatgactgagtggacgtcttgc
tctcgtacctgtggtagaggctctcagagcagacaggtagcctgcaccttgcagctagcc
aacggcaccctggtcaaagccaaggaccgcgactgtgccggccccaagccggcccccaac
cagcgctgcgagggccaggactgtctcaccgtgtgggaggctggcgtgtggtctgagtgc
tcggtgaagtgtgggcggggggcacgccatcggctggtgaagtgcaccaacccacggaaa
aagtgtgacctgtcgaccctaccccgtgagacggaggactgtgaggactactccaagtgt
tacatctggaggacaggagactgggccaagtgctcggtcacctgtggcaaannattgcag
tcccgggttatccagtgcatgcacaaatcaccgggcagccacggggaagagtgcttctcg
tttatcgagaagccagctggggaagaccggccatgtcagcagcaggcgtgcaacgagagg
atcaatcttaacnncatcacctcgccacgcctggctgccctgacgttcaagtgtttacgg
gaccagtggccggtttactgcaaagtcatccgcgagaagaacctctgccaagacatgcgc
tggtatcaacgctgctgtgaaacatgccgggacttttacgcacagaagatgcagcagagg
agttga
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