Oncorhynchus gorbuscha (pink salmon): 123990304
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Entry
123990304 CDS
T07892
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Pathway
ogo03018
RNA degradation
ogo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123990304
09123 Folding, sorting and degradation
03018 RNA degradation
123990304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ogo03019
]
123990304
03041 Spliceosome [BR:
ogo03041
]
123990304
Messenger RNA biogenesis [BR:
ogo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123990304
mRNA degradation factors
5'-3' decay
Lsm complex
123990304
Spliceosome [BR:
ogo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
123990304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
123990304
NCBI-ProteinID:
XP_046146854
LinkDB
All DBs
Position
LG12:79055443..79059559
Genome browser
AA seq
91 aa
AA seq
DB search
MAATPATNPSQLLPLELVDKCIGSRIHIVMKNDKEIVGTLLGFDDFVNMVLEDVTEFEIT
PEGRRITKLDQILLNGNNITMLIPGGEGPEV
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcagccactccagccacaaatccgtcacagttgctcccacttgagctcgtggacaaa
tgtataggttcccgaatccatatcgtcatgaagaacgacaaagaaattgttggcaccctg
ttgggtttcgacgattttgtcaacatggtgctcgaggacgtgacagaatttgaaatcaca
ccggagggaaggaggatcaccaaactggatcagatactgctcaacggcaacaacatcacc
atgctcatacctggaggtgaagggcccgaagtatga
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