Oncorhynchus gorbuscha (pink salmon): 123990394
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Entry
123990394 CDS
T07892
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
ogo
Oncorhynchus gorbuscha (pink salmon)
Brite
KEGG Orthology (KO) [BR:
ogo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ogo03000
]
123990394
Transcription factors [BR:
ogo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
123990394
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-Di19
zf-C2H2_jaz
Homeodomain
zf-C2H2_15
zf-H2C2_5
zf-met
zf-C2H2_6
Zn_SUZ12
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
123990394
NCBI-ProteinID:
XP_046146906
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All DBs
Position
LG12:55098292..55170200
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AA seq
1214 aa
AA seq
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MADGPRCKRRKQANPRRNNVTSYSNVVKTPGSDSDDEDKLHIVEEDGSLADGADCDSNVP
SEDHNGDRSDEAREECGSDGEDDGRTDALVEEMLQQGDTAVIYPEAPEDEPRQGTPEASG
HDENGTPDAFSQLLTCPYCSRGYKRYTSLKEHIKLRHEKSEDNFSCSQCSYTFAYRTQLE
RHMTAHKAGRDQRHVTQSGGNRKFNCTECEKAFKYKHHLKEHLRIHSGEKPYECSNCKKR
FSHSGSYSSHISSKKCISVISAVNGRPRPSAKASQCPSPAMPASPSSTTARTQIWDKPLQ
EQLPLNQIKSEPVDYEYKAMVLSPATTGGNGHGGGVLNGGAAGPLQGAVQAVMLPTMGLV
SPISINLADLQNILKVAVDGNMIRQMLENNAKAAGTGTGATGVPHQQLISAISLPIIGQD
GNATKIIINYSLDPSQTQLTAQNLKKEPQTLVTMPGQPQAQLLAEVAIEPCSKAQQKLPE
DLTLSRPPRSKEEKMEEENEKEEGEETTKTCLLCGDCPGGLDVLHALEHCKKASGLRING
DKSESAIASLLSEGVGNQPKNLLSLLKAYFALNAEPTKEELSEISDSVSLPTDVVKKWFD
KMQSSQVSLGAPTPPSEEEGPLSESPGATVVSPKVRPEQDTEGPTMMQSGPAEATPAEVN
GSMRSPASPTPLNLTAGGPVPAKPSSSDSTDGPLDLSLPKPTREEAAAAATYHASVYSHQ
DEPLNLTKTCTTKKELPLAGATGHHVTRQPVSLYTASPQSANPISIMTTQLPSGTIYAIT
DQGRAGMPCLRAVTTSNNQTILIPQLAYTYTTTATANSPAGTETQEKTTLQVNGIKEERQ
DTSSEGVSTMEELNDSDSAPSRKKMRKTESGMYACDLCDKIFQKSSSLLRHKYEHTGKRP
HECGICRKAFKHKHHLIEHMRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKKEAL
EGSQGGIGEEVLEEEMESPVGLALGLGGEQQEQSDSRPTSSHLDSDERGSSTREDEEESE
EEGEEEDMETAAGEEVEGDPDRVLDMDDIQVVRIGDEGGDEEEEAEKEEDTGREEGESEE
EQGVERVVVGGEGEEGEEEEEGVVGVEVKEEQEEEEVTGKKADTRQEEVQENREKEEEHG
GEKQQAEEQVEEELSEKEETMDTEKGLTSEDKEESGSRAAEESEVMKENEGETNRNTVSE
DKNQTPTGEKGDPN
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaatccgaggaggaataacgta
accagctacagtaatgtggtgaagacgcctggctcagactcagatgatgaggacaagctt
cacatcgtggaggaggacgggagtctggcagacggggcagactgtgacagtaatgtgccc
agtgaagatcacaacggagaccgctcagatgaagcgagggaggagtgtggttcagacggg
gaggacgatggcaggacggacgctctggtggaggagatgctgcagcagggagacacagcc
gtcatttacccagaagccccggaggacgagccacgccaagggacccccgaggccagcgga
catgacgagaacggcactccggatgcgttctcccagctcctcacctgtccctactgctcc
cgcggctacaagcgttacacgtccctgaaggagcacatcaagctgcgccacgagaagagc
gaggacaacttcagctgctcccagtgcagctacacttttgcctaccgcacacagctggag
agacacatgacggcccacaaagctggtagagaccagaggcacgtgacgcagtcggggggc
aaccgcaaattcaactgcaccgaatgtgaaaaagcatttaagtacaagcaccacctgaag
gagcacctacgcatccacagcggagagaagccatacgagtgctccaactgcaagaagcgt
ttctcccactcgggttcctacagttcccacatcagcagtaagaagtgcatcagcgtgatc
tcggcagtcaacggccgcccccggcccagcgccaaggcgtcccagtgcccgtccccagcc
atgcccgcctcgccctcctccaccaccgcacgcacacagatctgggataaacctttacag
gagcaactacccctcaatcagatcaagagcgagccagtggactatgagtacaaggccatg
gtgttgtctccagcaacgacaggaggaaacggtcatggaggaggggtgttaaacgggggt
gccgcgggccccctgcagggtgcggttcaggctgtgatgctgcccaccatgggtctggta
tctcccatcagcatcaacctggcagacctgcagaacatcttgaaggtggcggtggacggt
aacatgatcagacagatgttggagaacaatgccaaggcagcggggacaggcacaggggcg
acgggtgttcctcaccagcagctcatctcagccatcagtctccccatcatcggtcaggac
ggcaacgctaccaagatcatcatcaactacagcctcgatcccagccagacccagctcact
gcccagaacctgaagaaggaacctcagactctggttacaatgccaggccagccccaggct
cagctcctggccgaggttgccatagagccctgcagcaaggcccagcagaaactcccagag
gacctgacactcagcaggccccccaggagcaaagaggagaagatggaagaggaaaacgag
aaggaggagggggaggagaccactaagacctgtctgctctgtggcgactgccccggtggt
ctggacgtgctccacgcactcgagcactgtaagaaggcctcaggcctcaggatcaatggg
gacaaatcagagtcggccatcgcctcgttactgtccgagggggtcgggaaccagcccaag
aacctcctgtccctcctcaaggcctacttcgccctaaacgctgagccaaccaaggaggag
ctcagcgagatctcagattcagtcagcctgcccaccgacgtggtcaagaagtggttcgac
aagatgcagagcagtcaggtctcactaggagctccgacacctccgtctgaggaagaggga
cccttgtctgagagtcctggggccacagttgtgtcccctaaggtaagaccagagcaggac
acagagggtcccaccatgatgcagtccggcccagccgaggccactccggctgaggttaac
ggctccatgcgctccccagcctcccccacaccactaaacctgaccgccggggggcccgtc
ccagccaaaccctcctcctcggacagcactgatggccctctggacctgtcgctaccaaag
cccacccgagaggaggccgcagccgccgccacttaccacgcctctgtttactcccatcag
gacgaacccctgaacttgacgaagacttgcacaacaaagaaagaacttccgctcgccggc
gccactggccaccacgtgactagacaacctgtgtccctgtacaccgccagcccacaaagt
gccaaccccatcagtatcatgaccactcagctgcccagcgggaccatttatgccatcact
gaccagggccgtgcaggcatgccctgcctccgggcagttaccactagtaacaaccagact
atcctcatcccacagctggcctatacctataccactacagctacagccaacagccctgca
gggacagagacacaggagaagaccacactgcaagtcaacggcatcaaggaggagcgtcag
gacaccagctcagagggcgtgtccaccatggaagagctgaacgactcagactccgcccct
tccaggaagaaaatgaggaaaacggagagtgggatgtacgcctgcgacctgtgtgacaag
atcttccagaagagcagctctctgctccgacataaatacgaacacacaggcaagcgaccc
cacgagtgcggtatctgcaggaaggccttcaaacacaagcaccacttgatagaacacatg
cgtctccactccggggagaaaccctaccagtgcgacaagtgtggcaagcgcttctctcac
tcgggctcttactcccagcacatgaaccaccgttactcctattgcaagaaggaggcgctg
gaaggaagtcaaggaggtataggggaggaggtgctggaggaggagatggagagccctgtg
gggttggccctgggcctcggaggggagcagcaggagcagtcagacagcaggcccacctcc
tcccacctggactctgacgagcgagggagcagcaccagggaggacgaggaggagagcgag
gaggagggggaggaggaggacatggagacagcggcaggggaggaggtggagggggatccg
gacagagttctggatatggatgacatacaggtggtgcggataggagacgagggaggggac
gaggaggaagaggcggagaaggaagaagacactggtcgagaggagggagagagtgaggaa
gagcagggagtggagagagtagtggtcgggggtgaaggggaggaaggagaagaagaagag
gagggggtagtgggggttgaagtaaaggaggagcaggaggaagaggaggttacagggaaa
aaagcagacacaaggcaagaggaggtacaggagaacagggagaaagaggaggaacatgga
ggtgagaagcaacaggctgaggagcaggtggaggaggagctgtctgagaaggaagagaca
atggacacagagaaaggattgacctcggaggacaaggaagagtcagggtcgagggcggcg
gaggaaagtgaggtcatgaaagagaatgaaggtgaaacaaacaggaacactgtttcagaa
gacaagaaccagacaccgacaggagagaaaggagatccgaattaa
DBGET
integrated database retrieval system
